| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0726 |
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| Symbol | bhbA |
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| ID | 5711161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 733404 |
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| End bp | 735542 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266634 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_001532072 |
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| Protein GI | 159043278 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.999011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAG GCAAAGACGC GTGGGCTGAC CTCGCCGCCA AGGAGTTGCG CGGCAAGCCG
TTGGAGACGT TGACCTGGAA GACGCTGGAG GGGATCGACG TCAAACCCCT CTATACCGCC
GAGGACCTGG AGGGGCTCGA CCATCTGGGA TCGGTCCCCG GTCAGGCGCC CTTCACGCGC
GGGGTGAAGG CCACGATGTA TGCGGGCCGC CCCTGGACGA TCCGGCAATA TGCGGGCTTC
TCCACCGCCG AGGAGAGCAA CGCGTTCTAC CGCAAGGCCC TTGCCGCCGG GCAGCAGGGC
GTGTCGGTGG CGTTCGATCT GGCCACCCAC CGCGGCTATG ACAGCGACCA TCCCCGGGTG
GAGGGCGATG TGGGCAAGGC CGGCGTGGCC ATCGACAGTG TCGAGGACAT GAAGATCCTG
TTCGACGGCA TCCCGCTCGA TCAGGTGTCG GTCTCGATGA CCATGAACGG CGCCGTGATC
CCGATCCTCG CGAATTTCAT CGTCACCGGC GAAGAGCAGG GCCATGACCG GTCTGTCCTG
TCGGGCACGA TCCAGAACGA CATCCTCAAG GAATTCATGG TCCGCAACAC CTATGTCTAT
CCGCCTGAGC CCTCGATGCG GATCATCGCG GACATCATCG AATACACCTC CGCCGAGATG
CCGAAATTCA ACTCGATCTC GATCTCCGGC TACCACATGC AGGAGGCGGG CGCGAACCTG
GTGCAGGAGC TGGCCTTCAC CCTGGCGGAC GGGCGCGAAT ATGTCCGCGC CGCCATCGCG
CGCGGCATGG ACGTGGACAA GTTCGCAGGC AGGCTCAGCT TCTTCTTCGC CATCGGCATG
AACTTCTTCA TGGAAGCCGC CAAGCTGCGC GCGGCGCGGA TGCTGTGGCA CAAGATCATG
TCCGAGTTCG AGCCGAAGAA CCCGCGCTCC ATGATGCTGC GCACCCATTG CCAGACGAGC
GGTGTCTCCT TGCAGGAGCA AGACCCCTAC AACAACGTGA TCCGCACCGC TTACGAGGCG
ATGAGCGCGG TTCTGGGCGG GACGCAATCG CTGCATACCA ACGCGCTGGA CGAGGCGATT
GCCCTGCCGA CGGAATTCTC GGCGCGCATC GCCCGGAACA CCCAGCTGAT CCTGCAGGAG
GAGACCGGCG TGACCAACGT GGTCGATCCG CTGGCGGGCT CTTACTACGT CGAAAGCCTG
ACCAACGAGC TGGCCGAAAA GGCCTGGGCC TTGATCGAGG AGGTCGAGGA ACTGGGCGGC
ATGACCAAGG CCGTGGCCTC TGGCATGCCC AAGCTGCGGA TCGAGGAGTC CGCGGCCCGA
CGCCAGGCGA TGATCGACAA GGGCACGGAA GTGATCGTGG GGGTCAACAA GTACCGCAAG
GACAAGGAAG ACCCGATCGA CATCCTGGAG ATCGACAATG CCAAGGTGCG CGACGGGCAG
GTGGCCCGGC TCGCGAAGAT CCGCGCGGAG CGGGACGAGG CGGCCTGCGA CTCGGCCCTG
GCCGAGGTGG AGCGGTGCGC GGCTGAGGGG GGCAACCTTC TGGCCGCGGC GGTGGAAGCG
GCTCGCGCGC GGGCCAGTGT GGGAGAAATC AGCATGGCCA TGGAAAAGGT GTTCGGACGC
CACCGGGCAG AGGTGAAGAC GCTCGCGGGT GTCTATGGCG CGGCCTACGA GGGCGATGAC
GGGTTCGCCG CCATCCAGAA ATCGGTGGAG GATTTCGCCG CCGAGGAAGG GCGCAGGCCC
CGGATGCTCG TGGTCAAGAT GGGCCAGGAC GGCCATGACC GGGGCGCCAA GGTGATCGCC
ACCGCCTTTG CCGATATCGG GTTCGACGTG GATGTGGGGC CGCTCTTCCA GACCCCGGAA
GAGGCCGCGC AGGACGCTAT CGACAACGAT GTGCACGTCA TCGGCATCTC CAGCCAGGCC
GCCGGTCACA AGACCCTTGC CCCCAAGCTG GTCGATGCGC TGAAGGCCCA GGGCGCGGGG
GATATCCTGG TGATTTGCGG CGGGGTGATC CCGCAGCAGG ACTACCAGTA CCTCTATGAC
CGCGGGGTGA AGGCGATCTT CGGGCCGGGT ACGAACATCC CCGAGGCGGC CCAGGACATC
CTGCGCCTGA TCCGGGAATC CCGGGCCGAA GCGGCCTGA
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| Protein sequence | MTKGKDAWAD LAAKELRGKP LETLTWKTLE GIDVKPLYTA EDLEGLDHLG SVPGQAPFTR
GVKATMYAGR PWTIRQYAGF STAEESNAFY RKALAAGQQG VSVAFDLATH RGYDSDHPRV
EGDVGKAGVA IDSVEDMKIL FDGIPLDQVS VSMTMNGAVI PILANFIVTG EEQGHDRSVL
SGTIQNDILK EFMVRNTYVY PPEPSMRIIA DIIEYTSAEM PKFNSISISG YHMQEAGANL
VQELAFTLAD GREYVRAAIA RGMDVDKFAG RLSFFFAIGM NFFMEAAKLR AARMLWHKIM
SEFEPKNPRS MMLRTHCQTS GVSLQEQDPY NNVIRTAYEA MSAVLGGTQS LHTNALDEAI
ALPTEFSARI ARNTQLILQE ETGVTNVVDP LAGSYYVESL TNELAEKAWA LIEEVEELGG
MTKAVASGMP KLRIEESAAR RQAMIDKGTE VIVGVNKYRK DKEDPIDILE IDNAKVRDGQ
VARLAKIRAE RDEAACDSAL AEVERCAAEG GNLLAAAVEA ARARASVGEI SMAMEKVFGR
HRAEVKTLAG VYGAAYEGDD GFAAIQKSVE DFAAEEGRRP RMLVVKMGQD GHDRGAKVIA
TAFADIGFDV DVGPLFQTPE EAAQDAIDND VHVIGISSQA AGHKTLAPKL VDALKAQGAG
DILVICGGVI PQQDYQYLYD RGVKAIFGPG TNIPEAAQDI LRLIRESRAE AA
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