| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0712 |
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| Symbol | lysE |
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| ID | 5711147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 720340 |
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| End bp | 720966 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641266620 |
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| Product | lysine exporter protein |
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| Protein accession | YP_001532058 |
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| Protein GI | 159043264 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1279] Lysine efflux permease |
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| TIGRFAM ID | [TIGR00948] L-lysine exporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTTCCC CCACTCTTCT CGCGGCCGGG TCCGGCTTTG CCCTCGGGCT GCAACTGATC
GTGGCGATCG GGGCGCAGAA TGCGTTCCTG CTGCGCCAGG GGCTGCGGCG GAGCCATGTG
GGGGCGCTGG TGGTGATCTG CACCCTGTCG GATGCGATCC TGATCGCGGC GGGGGTGTCG
GGCTTTGCCG CGATAGAGGC GCGGATGCCG TGGCTTGCGC CGGTCACACT CTGGGCGGGG
GCGGCGTTCC TGGTCTGGTA CGGGGCGACC CATGCGCTGG CGGCCTGGCG GGGCGGCGCG
GCGCTGGACC CGGCGCGGTC CGGGGCCGAG AGCCTGCGCG CCGCGGTGCT GACCTGTCTC
GCGCTGACCT GGCTCAACCC CCATGTCTAT CTCGACACGC TGGTGGTGAT CGGGGCGCTT
TCGGCGCAGT TCGGCGAGGC ACGGGGCGCC TTCGGGGTCG GGGCGGCGGC GGCGAGCCTG
GTATTTTTCG CTGCCCTCGG TTACGGCGCG CGGGCGCTCA GCCCGGTCTT TGCCCGCCCC
CGGGCGTGGC AGGTTCTGGA CCTGATCATC GCGGTGACCA TGTGGGCGCT GGCAGCAAAG
CTGCTGATCC GGGGCGTGCC GGGATAA
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| Protein sequence | MLSPTLLAAG SGFALGLQLI VAIGAQNAFL LRQGLRRSHV GALVVICTLS DAILIAAGVS
GFAAIEARMP WLAPVTLWAG AAFLVWYGAT HALAAWRGGA ALDPARSGAE SLRAAVLTCL
ALTWLNPHVY LDTLVVIGAL SAQFGEARGA FGVGAAAASL VFFAALGYGA RALSPVFARP
RAWQVLDLII AVTMWALAAK LLIRGVPG
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