| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0692 |
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| Symbol | hyuB |
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| ID | 5711127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 698375 |
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| End bp | 700072 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641266601 |
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| Product | hydantoin utilization protein B |
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| Protein accession | YP_001532039 |
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| Protein GI | 159043245 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.755562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGC CCGAGATCGA CCCGATCACC CTGGCCGTGC TCGCCGGGCG GATGGAGCAG
ATCGCCGACG AGATGGACGC GACGCTCTTC CGCGCGGCGT TCAACCCGAT CATCGCAGAG
GCGCATGATG CCTCCCACGG GCTTTACCAT GCAGAGACCG GCGACACGCT GGTGCAGGGC
AAGTCCGGCC TGCCGATCTT CGTGGGTGTG ATGGCCTTTG CGGTGAAGGC GGTGATCGAG
AAGGCCGCGC GCGACGGCGA CCTGGCCGAG GGCGATGTCT ATATCTTCAA CGACGCCCAT
ATCGGCGGCA CCCACCTGAG CGACATGCGG CTGGTGCGGC CGTTCTTCCG GGATGGCAAG
CTGGTCTGCT ACCTCGCCTC GGTCGGCCAT TGGCACGATG TGGGCGGGGC GGTGCCGGGC
AACTACAACC CCGCGGCCAT GGAGGTGTTT CAGGAGGCCT TCGTCCTGCC GCCGGTGAAA
CTGGTGCGCG CGGGTGTGCT GCAACAGGAC ATCGTCGATA TCCTGCTGCG CAACACCCGC
CTGCCCGCCT CGGCCCAGGG CGATCTGAAC GGGCAGTTGA GCGCACTGGA TCTGGGCGCA
AAACGGCTCG ACGCCCTGCT GAACGACTAT GGCACGGACA CCGTGCAGGC GGCCCTGACC
GCCCTGACCG ACCGGGCCGA GACGCTCATG CGCGCCGAGA TCGCCGCCCT GCCCGATGGC
CGGTGGAAGG CGGAGGATTT CCTCGACAAT GACGGGATCG ACCCGGAGGC GCTGCCGATC
CGGGTCGCGC TGGAGGTCAC GGGCGACCGG CTGACGCTCG ATTTCACCGG CACGGCGGGC
GCGGTGAAGG GGCCGGTCAA CATCGCCCTG CCCACAGCGA TTGCCACGGC CTACGTGGCG
ATCAAGCATA TCTTTCCGAA CCTGCCCGCC AATGCCGGGG TGATGCGCCC GATCACGGTG
ACGGTGCCCG AGGGATCGCT GCTTGCAGCG GAATTCCCCG CACCCACGGG GGGGTATACC
GAGACGATCC TGCGCATGAT CGACGTGATC TTTTCCGCCG CCGCGCAGGC AGCGCCGGAG
CGGGTGGTTG CCAATGCCTA TGGCACGATC AACGCGCTGT CGATTGCCGG GACGCGGGCC
AACGGGGCGC GCTGGGTGAT GTTTTCCTTC TACGGCGGCG GGCATGGTGG CAGCCTCGAG
AGCGACGGGC TGAACCACGG CAATGCACCG ATTTCCACTG CCACAATCCC ACCTGCGGAG
ATCCTGGAGG CGGCCTATCC CGTGATGTTC CGGCAATGGG CGCTGCGCCC CGACAGCGCG
GGCGCGGGGG CGCAGCGTGG GGGCCTCGGC GCGGTTTACG AGATCGAGTT GCTGGAGGAG
GAGGCCGAGG CGTTTCTGTT CGGCGAGCGC GGGCGGTTCG CGCCGCAAGG GGTCGCGGGC
GGCGGGGCGG CGGCGCTCAA TGTGTTCGCC CATGAGACCG ACGCAGGCTG GCAAACCCCG
GCGCTGGCCT CGAAAGCCGT GGGCATGAAG CTGCGGCGCG GGCAGCGGGT CCGGTTGGAG
ACGCCGGGCG GCGGGGGCTA CGGCCCGGCG GCGGCGCGCG CGCCGGAACG TGTCGCGCGG
GACGTGGCGC TTGGCTATCT GAGCCCCGAG GTGGCGACCG AAACCTACGG TCCCGCCTGG
CAGGAGCTGC CGGTATGA
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| Protein sequence | MTTPEIDPIT LAVLAGRMEQ IADEMDATLF RAAFNPIIAE AHDASHGLYH AETGDTLVQG
KSGLPIFVGV MAFAVKAVIE KAARDGDLAE GDVYIFNDAH IGGTHLSDMR LVRPFFRDGK
LVCYLASVGH WHDVGGAVPG NYNPAAMEVF QEAFVLPPVK LVRAGVLQQD IVDILLRNTR
LPASAQGDLN GQLSALDLGA KRLDALLNDY GTDTVQAALT ALTDRAETLM RAEIAALPDG
RWKAEDFLDN DGIDPEALPI RVALEVTGDR LTLDFTGTAG AVKGPVNIAL PTAIATAYVA
IKHIFPNLPA NAGVMRPITV TVPEGSLLAA EFPAPTGGYT ETILRMIDVI FSAAAQAAPE
RVVANAYGTI NALSIAGTRA NGARWVMFSF YGGGHGGSLE SDGLNHGNAP ISTATIPPAE
ILEAAYPVMF RQWALRPDSA GAGAQRGGLG AVYEIELLEE EAEAFLFGER GRFAPQGVAG
GGAAALNVFA HETDAGWQTP ALASKAVGMK LRRGQRVRLE TPGGGGYGPA AARAPERVAR
DVALGYLSPE VATETYGPAW QELPV
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