| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0688 |
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| Symbol | |
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| ID | 5711123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 693474 |
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| End bp | 694838 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641266597 |
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| Product | fumarate reductase/succinate dehydrogenase flavoprotein domain protein |
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| Protein accession | YP_001532035 |
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| Protein GI | 159043241 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0793917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGA CGGCCCCGCC AGAGGACGGG TTCGCGGTCA CGGTGGACAC GGTGATCGTG
GGCGGCGGCG CGGCGGGCAT GACCGCGGCC CTCGCCTGCC AGGAGGCCCG GCGCGCCTGC
GTGATCCTGG AGCGGGACGC TGTGCAGACC GGGTCGACCG CGCTCTCGGC CGGGCTGATC
CCGGCGGCGG GCAGTACCCT GCAGGCCGAG GCGGGGATCG ACGACAGCGC AGAGCGTTTT
GCCGCCGATA TCCAGCGCAA GGCCGGGGGT GAGGCCGATC CGGAGGTGGT CGCGGCCCTG
ACCGCAGCCT CGGGTCCGAC GCTCGACTGG CTGGCCGGGA CCCACGGGAT GCCGTTCTCG
GTGGTGTCGG ATTTCGACTA CCCGGGCCAT TCGCGCCGCC GGATGCACGG TCTGCCTAGC
CGGGCGGGGC GGGAACTGGT GGACCGGTTG CGCAACACCT GCACCGCGCG CGGGATCGAC
ATCCTGACCG GCGCCCATGT CACGACGCTC TTTGCCGATG CCGCGGGCCG GGTGCAGGGT
GTCGGCTACG CGCGGCCCGA TGGCGGGCTG GAAACCGTGG GCTGCGACCG CCTGATCCTG
GCCTGCAACG GGTTCGGCGG CAATCCCGAG ATGGTGGCCG CATACACGCC CGAGATCCGC
GACGCGCTCT ATTTCGGCCA TGCGGGCAAT ACCGGCGACG CGATCCGCTG GGGGGAGGCG
CTGGGCGCGC GGATGCGCCA TCTGGGCGCC TATCAGGGCC ATGGCAACGT CGCGCATCCC
CATGGGGTCC TCGTGACCTG GGCGGTGCTT TCGGAGGGCG GCATCCAGGT CAACCGCGAC
GGCCGCCGGT TCTGGAACGA GCTGCAGGGC TATTCCGAGG CCGCGCGCAC CGTCATCGCC
CAGCCAGGGG GCGAGGCCTA TGCCATCTTC GACAGCCGCA TTGCCAGCAT CGCGCGCCAG
TTCGAGGATT TTCGCGCCGC TGAGGCCGCG GGCGCGATCG TGACCGCGGA CACGCCCGAA
GCGCTGGCCG CGCGGCTCGA TCTGCCCGGG GGCGCGCTGG TGGAGACGAT GGTGGAGATC
GAAGGCACGA CGACCTGCAA CTTCGGGCGG GTGTTCGACC CGACCAAGCG GCTGCGCCCG
CCCTATCACG GGGTGCGGGT GACCGGCGCG CTGTTTCACA CCCAGGGCGG GCTCGACGTG
ACCGGCACGG GCCGTGTCAG GCGGGCGTCC GGCGGGCTGC TGCCGAACCT CTATGCGGTG
GGCGGGGCCG CCTGCGGCGT GTCGGGGTCG GGCGATGACG GGTATCTGTC GGGCAACGGG
CTGCTAAGTG CGGTGGTGCT GGGTCGGCTG GCCGGGGCGG CCTGA
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| Protein sequence | MTVTAPPEDG FAVTVDTVIV GGGAAGMTAA LACQEARRAC VILERDAVQT GSTALSAGLI
PAAGSTLQAE AGIDDSAERF AADIQRKAGG EADPEVVAAL TAASGPTLDW LAGTHGMPFS
VVSDFDYPGH SRRRMHGLPS RAGRELVDRL RNTCTARGID ILTGAHVTTL FADAAGRVQG
VGYARPDGGL ETVGCDRLIL ACNGFGGNPE MVAAYTPEIR DALYFGHAGN TGDAIRWGEA
LGARMRHLGA YQGHGNVAHP HGVLVTWAVL SEGGIQVNRD GRRFWNELQG YSEAARTVIA
QPGGEAYAIF DSRIASIARQ FEDFRAAEAA GAIVTADTPE ALAARLDLPG GALVETMVEI
EGTTTCNFGR VFDPTKRLRP PYHGVRVTGA LFHTQGGLDV TGTGRVRRAS GGLLPNLYAV
GGAACGVSGS GDDGYLSGNG LLSAVVLGRL AGAA
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