| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0640 |
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| Symbol | |
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| ID | 5712099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 639402 |
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| End bp | 640199 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641266548 |
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| Product | peptidase S49 |
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| Protein accession | YP_001531987 |
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| Protein GI | 159043193 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCT GGCTCCCCTT CGTGAAATCG GACCCGACCG TCGCCGTGGT GCGCCTGCAA
GGCGCGATCG CGGCCACAGG CCGTGGCATG TTGAATGATC AGTCCGTGGG GCCGCTGCTG
GAACGCGCGT TCACCAAGGG CAAACCGGAC GCGGTGGCGC TGGTGATCAA CTCCCCCGGC
GGCTCGCCCG CCCAAAGCTC GCTGATCGGC GCGCGCATCC GGCGGCTGGC TGAGGAAAAA
GAGGTGCCTG TCTACGCCTT CGTCGAAGAT GTGGCGGCCT CGGGCGGCTA CTGGATCGCG
GCCGCGGCGG ACGAGATCTG GCTCGACGCG ACCTCCATCG TCGGCTCGAT CGGGGTGATC
TCGGCCTCTT TCGGCTTCCA CGAGTTGATG GAACGGCAGG GGATCGAACG GCGCGTCTAT
ACCGCGGGCA AGGACAAGTC CCTGCTGGAC CCGTTCCGCC CGGAACGCCC CGAGGATGTC
GAGCGGCTCA AGGGTCTGCA GGCCCAGCTG CACGAGACCT TCAAGGGCCA TATCACCGCC
CGGCGCGGCG CGAAGCTGCC CGAGGATCGC GACCTCTATA CCGGCGAGGT CTGGATCGGC
CAGCAGGGCA TCGATGTGGG TCTCGCCGAC GGGATCGGCC ACGTGGCCCC GGTGATGAAA
GAGAAATTCG GCGACAAGAC CCGGTTCCGG ACCTATGGCC CGCGCCGCCC GCTGATCAGC
CGCTTTGGCT TCTCGGTGGT GGACGACACG CTGCATGCCC TGGAGGCGCG CGGTCTCTGG
GCACGCTACG GGCTGTGA
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| Protein sequence | MKRWLPFVKS DPTVAVVRLQ GAIAATGRGM LNDQSVGPLL ERAFTKGKPD AVALVINSPG
GSPAQSSLIG ARIRRLAEEK EVPVYAFVED VAASGGYWIA AAADEIWLDA TSIVGSIGVI
SASFGFHELM ERQGIERRVY TAGKDKSLLD PFRPERPEDV ERLKGLQAQL HETFKGHITA
RRGAKLPEDR DLYTGEVWIG QQGIDVGLAD GIGHVAPVMK EKFGDKTRFR TYGPRRPLIS
RFGFSVVDDT LHALEARGLW ARYGL
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