| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0638 |
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| Symbol | |
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| ID | 5712097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 637586 |
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| End bp | 638542 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641266546 |
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| Product | ABC-A-subfamily transporter |
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| Protein accession | YP_001531985 |
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| Protein GI | 159043191 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.541118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAGC CTGTCGCAGA TATCGTCACC ATCACCGACC TGGTGAAAGC CTATCCCGGC
GGCTTTACCG CATTGAACGG TGTCACCCTG TCGATCCGGG AGGGGGAGAT CCTCGCCCTG
CTGGGGCCGA ACGGGGCGGG CAAGACCACG CTGATCTCCA CCATCTGCGG GCTCACCATG
CCCACGGGCG GCACGGTCAC CGTGGGCGGG CATGACGTGG TCGCCGACTA TCGCGCCACG
CGCCGGATGA TCGGGCTGGT CCCGCAGGAG CTGTCGCTGG AGCCGTTCGA GACGGTGGAG
GCGACGGTCG CCTTTTCCCG CGGGTTGTTC GGCAGGCCCC GCGACCCCGC CCGGATCGAA
AAGATCCTCC GCGACCTGAG CCTGTGGGAC AAGCGCGCCT CGAAGATCGT CGCATTGTCG
GGCGGGATGA AACGGCGGGT GCTGATCGCC AAGGCGCTGG CCCATGACCC GAAGGTGCTG
TTTCTCGACG AACCCACCGC CGGGGTCGAT GTGGAGCTGC GCCGGGACAT GTGGCGCGTG
GTCGAAGCGC TGAAGGCGGC GGGTGTCACC ATCATCCTGA CCACCCACTA TATCGAAGAG
GCCGAGGCGA TCGCCGACCG CATCGCGGTG ATCAACAAGG GCGAGATCCT GCTGGTCGAG
GAAACCGCGG GCCTGATGGC ACGCATGGGC AAGAAGGAGG CGGTGATCGA CCTCGCCGCG
CCGCTGGAGG CGCTGCCCGC GGCCCTGACC GGTCCTGACC TGACCCTCGC TGCGGGCGGG
CATCAGATCG TCTACACTTA CGACACCCAG GCCGAGCGCA CGGGCATCCG CCGCGTGCTC
AACGAGCTGG ACGCCGCGGG CATCGTGATG CGCGACCTGT CCACCCGGCA AAGCTCCCTG
GAGGACGTGT TCGTCTCGCT CGTCCACGAC GACGCGCCCC GGGAGGCCGC CCAATGA
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| Protein sequence | MSQPVADIVT ITDLVKAYPG GFTALNGVTL SIREGEILAL LGPNGAGKTT LISTICGLTM
PTGGTVTVGG HDVVADYRAT RRMIGLVPQE LSLEPFETVE ATVAFSRGLF GRPRDPARIE
KILRDLSLWD KRASKIVALS GGMKRRVLIA KALAHDPKVL FLDEPTAGVD VELRRDMWRV
VEALKAAGVT IILTTHYIEE AEAIADRIAV INKGEILLVE ETAGLMARMG KKEAVIDLAA
PLEALPAALT GPDLTLAAGG HQIVYTYDTQ AERTGIRRVL NELDAAGIVM RDLSTRQSSL
EDVFVSLVHD DAPREAAQ
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