Gene Dshi_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0620 
SymbolfabG2 
ID5712074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp612860 
End bp613612 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content66% 
IMG OID641266523 
Product3-oxoacyl-[acyl-carrier-protein] reductase 
Protein accessionYP_001531967 
Protein GI159043173 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.890979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCA AAACCGCTGT GGTGACCGGC GCGGCGCGCG GCATCGGCCT CGCAACCACG 
AAACTCTTGC TGGAACGTGG CTGGAAGGTC GCCATGATCG ACCGGGATGG CCCCGCGCTG
GCGGAAGCCT TGCAAGGTCT GGACGGGGTC CATGGCATCG ATTGCGACGT GTCGGACCCG
GAGGCGGTGG AGGGGATGAT CGCGGAAACC CTGCGAGAGT TCGGCCAGAT CGACGCCCTT
GTGAACAACG CCGGGGTCGC GGATTTCGGC CCGATCGAAG AGACCAGCTT CGCACGCTGG
AAAACGGTGA TGGAGACCAA CCTCGACGGT CCGTTTCTCT GTGTCCAGGC CGCCACCCCT
GCCCTGAAGG CCACGAAAGG CGCGGTCGTG AACATCGCCT CGATCTCGGG GCTGCGGGCC
TCCACCCTGC GCGTCGCCTA TGGCACGTCG AAGGCCGCCG TGATCCAGTT GACCCTGCAA
CAGGCCGTGG AACTGGGCGA GCACGGCATC CGCGCCAATT GCGTCTGCCC CGGCCCGGTG
CGCACCAAGC TGGCGATGGC GGTCCACTCG CAAGAGATCA TCGACGCCTA TCACGACGCC
ATCCCCCTGA ACCGCTACGG CTCCGAGCAG GAGATCGCAG AGGCGATCCT CTTCCTGTGC
TCCGAGAGGG CCAGCTTCAT CACCGGACAG GTCCTTGCGG CCGATGGCGG GTTCGAGGCG
ACGGGAATCG GCCTCCCGGC ACTGCGGGGC TAG
 
Protein sequence
MTSKTAVVTG AARGIGLATT KLLLERGWKV AMIDRDGPAL AEALQGLDGV HGIDCDVSDP 
EAVEGMIAET LREFGQIDAL VNNAGVADFG PIEETSFARW KTVMETNLDG PFLCVQAATP
ALKATKGAVV NIASISGLRA STLRVAYGTS KAAVIQLTLQ QAVELGEHGI RANCVCPGPV
RTKLAMAVHS QEIIDAYHDA IPLNRYGSEQ EIAEAILFLC SERASFITGQ VLAADGGFEA
TGIGLPALRG