| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0558 |
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| Symbol | dadA |
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| ID | 5712011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 545054 |
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| End bp | 546313 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641266460 |
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| Product | D-amino-acid dehydrogenase small subunit |
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| Protein accession | YP_001531905 |
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| Protein GI | 159043111 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCG TTATCATGGG CGCGGGCGTC ATCGGCGTCA CCACCGCATA TTACCTGGCC
AAGCAAGGCG TAAAGGTCGT GGTCATTGAC CGTCAGACCG GTCCGGGCCT GGAGACGAGT
TACGCCAACG CGGGGCAGTT GAGCTACGGG ATGAGCTCGC CTTGGGCGGC GCCGGGTATT
CCGCTCAAGG CGGTCAAATG GATGTTCATG AAACGTCGTC CGTTGTTCAT CATGCCGCTC
CTGAGCCCGA CCATGTGGAA ATGGTGTCTG CAGATGCTGC GCAACTGCAA CGCCGAAAGC
TACGCGATCA ACAAGGGGCG CATGGTGCGT GTGTCCAGTT ATTCGCGCGA TGTCATGCCG
GATCTGATCG CCGACACCGG TATCGAATAC GACGGACGCC AGATGGGCAC GCTGCAACTT
TTCCGCACCG CCAAACAGAT GAAAGCATCC AAGGCCGATC AAGCGGTCTT GGCCGAGTAC
GGCTCGCCAT ACGAGGTGCT CGGGCGCGAT GCCTGTATAG AAGTAGAACC GGCCTTGGCG
GAAGTCCGCG GAAAATTCGT CGGCGGATTA CGCCTGACTT CGGACCGCAC CGGCGATTGC
CGCATGTTCA CGATTGCCTT GACCGACAAG TGCATCGAAA TGGGCGTTGA GTTCCAGTAC
GGCCAAACCA TCAAGGCCAT CGCCGTCGAG AATGGCAAGA TCTCGGGTGT GGACACGGAA
ATTGCCGGGC GTATTTCCGG GGACGCCTAT GTGTGTGCCA TGGGCAGTTA CGCCGTGAAC
GTTCTGAACC CCATCGGGAT CAGGCTGCCG GTCTATCCGG TCAAGGGCTA TTCCGTCACG
CTCCCCGTCA CGAACGACGC GTTCGCCCCG CAATCGACGA TCATGGACGA GACGCACAAG
GTCGCGATCA CCCGCTTGGG CGATCGTATC CGCGTGGCGG GGCAAGCCGA GATCGTGGGC
TATTCCAATC GCCTGGGCCC GCATGCCACC GACACGGTAC GGCATGTGAT TGGCGATCTG
TTTCCCAAGG GCGGCGATCT CTCTCGTGCC GAAGGTTGGA CGGGTTTGCG CCCGATGACG
CCCGATGGCA CGCCGGTTCT CGGCCCGACG CGTTACGAAA ACCTGTTCCT GAACACCGGG
CATGGGACGC TGGGCTGGAC CATGGCTTGT GGCTCGGGCC GGGCCGTTGC CGATGTGGTC
ATGGGAAAAC CGCCTGAAAT CTCGATGGAG GGGCTGACAG CGGCGCGCTA CGCGCGGTGA
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| Protein sequence | MKVVIMGAGV IGVTTAYYLA KQGVKVVVID RQTGPGLETS YANAGQLSYG MSSPWAAPGI
PLKAVKWMFM KRRPLFIMPL LSPTMWKWCL QMLRNCNAES YAINKGRMVR VSSYSRDVMP
DLIADTGIEY DGRQMGTLQL FRTAKQMKAS KADQAVLAEY GSPYEVLGRD ACIEVEPALA
EVRGKFVGGL RLTSDRTGDC RMFTIALTDK CIEMGVEFQY GQTIKAIAVE NGKISGVDTE
IAGRISGDAY VCAMGSYAVN VLNPIGIRLP VYPVKGYSVT LPVTNDAFAP QSTIMDETHK
VAITRLGDRI RVAGQAEIVG YSNRLGPHAT DTVRHVIGDL FPKGGDLSRA EGWTGLRPMT
PDGTPVLGPT RYENLFLNTG HGTLGWTMAC GSGRAVADVV MGKPPEISME GLTAARYAR
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