| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0555 |
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| Symbol | araB |
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| ID | 5712008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 541855 |
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| End bp | 543489 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641266457 |
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| Product | ribulokinase |
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| Protein accession | YP_001531902 |
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| Protein GI | 159043108 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1069] Ribulose kinase |
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| TIGRFAM ID | [TIGR01315] FGGY-family pentulose kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTGTT TTATCGGTGT CGATGTCGGC ACGGGCAGCG CCCGCGCAGG GGTTTTTGAT
CTCGAAGGGA CCCTTCTTGC CAGCAGGAAG CACGACATCC AGATGTGGCG CGCACTTGGC
AACATCGCAG AGCAGTCCTC CGATGATATC TGGCAGGCGG TCTGCAGCTG CGTGCGTGGG
GCAATCTCCG ACGCGGGGAT CTCTCCGCAA GAGGTCCGCG GCATCGGCTT CGACGCGGCC
TGTTCCCTGG TTGCCTTGGA CGGCGACATG CGCCCGCTCA GTGTCAGCGC CTCGGGCGAT
GTCGCGCGCA ATGTCATCGT CTGGATGGAC CAGCGTGCCA CCGATCAAGC CGCTCGGATA
AACGCCAAGG AGTATCCCGT TTTGGAATTT GTCGGTGGTG CGATCTCGCC GGAGATGCAG
ACCCCGAAAC TGCTTTGGCT GCGGGAGAAC ATGCCTGAGA GCTTCGCGGC TGCCGGGCAG
TTTTTTGATC TTGTCGACTA CCTTACCTGG GCCGCAACCG GGTCACTGGC ACGCTCTTGC
TGTACGGTGA CATGCAAATG GACCTACCTC GCGCATGAGG ATCGATGGGA TAACAGCTAT
TTCGAAGAAA TCGGTTTGCG GGAACTGGCG TCGGAGAACT TCTCCCGCAT CGGGACTGAG
ATAGTGCCTC CTGGATCTGC GTTGGCCCAA GGCCTGAGCC ATGGCGCCGC CGCTCAGATG
GGCCTTTTGG CCGGGATACC TGTTGCAGCG GGATTGATCG ATGCGCACGC GGGCGGGATC
GGCACGGTCG GTGCCGATCC CGAGCGCGGT CCCGAGGCCA CGATGGCCTA CGTCTTTGGC
ACCTCGGCCT GCACCATGTC GACATCGCCC GAAGCGCACA GGGTGCCCGG TGTCTGGGGG
CCCTATTACT CTGCCATGGT GCCAGGCATG TGGTTGTCCG AAGGGGGCCA ATCCGCAGCG
GGCGAAGCCA TTGCGCATCT CGTGACCGTC CATCCCGCCA GCGCCGAGGC CGAGGCAGCC
GCCCGGGCCG AGGGGCTGTC ATTGCAAACC TATCTCCTGC GCCAAGTTGA CCGCCGCGTC
TCGGAAAAAA GCGAAGTTGC TTTGCTCGCC GGTGCGCGCG TGGTGGTGCC GGATTTCCTC
GGCAACCGCG CCCCGTTTGC AGACCCGGGG GCCACGGGCG CGATCTTGGG CCTGACGCTG
TCTGCGGATT TCGAGGACCT CCTTGCTACG TATGTCGCCG CGGTCCTCGG CGTCGGATAC
GGGCTGAGGC AGATCATGCA GGCGCAAGGC CAGCATGGAG TGCGACCTTC GACCATCGTG
GTCAGCGGCG GTGCCGGGGA AAGCGATACG ATCAAGCAGC TTCTGGCGGA CTCGAGCGGT
TTTCCGGTGC TGTCGACACG TTCGGCCGAA CCCGTGTTGC TTGGCGCCGC GATGTTGGGA
GCGGTCGCGG CTGGGGCGTA TCCGACAATC CAATCGGCAA TGTCCGCGAT GTCGTCTGTC
AAAGCACGCT TCGACCCGTC GTCTGCCGAG ATCTTGGCGC TGCATCAAAA ACGTTTCGAG
GCCTTCGAGA TGCTGCAAAA GGCAGATCAA ACGGTCCGAC AAGCCATGGT GGCCTTGCCG
AAGGGGTCGG TTTGA
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| Protein sequence | MTCFIGVDVG TGSARAGVFD LEGTLLASRK HDIQMWRALG NIAEQSSDDI WQAVCSCVRG
AISDAGISPQ EVRGIGFDAA CSLVALDGDM RPLSVSASGD VARNVIVWMD QRATDQAARI
NAKEYPVLEF VGGAISPEMQ TPKLLWLREN MPESFAAAGQ FFDLVDYLTW AATGSLARSC
CTVTCKWTYL AHEDRWDNSY FEEIGLRELA SENFSRIGTE IVPPGSALAQ GLSHGAAAQM
GLLAGIPVAA GLIDAHAGGI GTVGADPERG PEATMAYVFG TSACTMSTSP EAHRVPGVWG
PYYSAMVPGM WLSEGGQSAA GEAIAHLVTV HPASAEAEAA ARAEGLSLQT YLLRQVDRRV
SEKSEVALLA GARVVVPDFL GNRAPFADPG ATGAILGLTL SADFEDLLAT YVAAVLGVGY
GLRQIMQAQG QHGVRPSTIV VSGGAGESDT IKQLLADSSG FPVLSTRSAE PVLLGAAMLG
AVAAGAYPTI QSAMSAMSSV KARFDPSSAE ILALHQKRFE AFEMLQKADQ TVRQAMVALP
KGSV
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