Gene Dshi_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0524 
Symbol 
ID5711977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp508895 
End bp509974 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content62% 
IMG OID641266426 
Productaldo/keto reductase 
Protein accessionYP_001531871 
Protein GI159043077 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATC GAACGCTGGG TCGGAGCGGT CTGAAGATTT CGGTCATTAC TATGGGGACC 
TTCACTTTCG GCGGGCGCGG TGATTTCGGC CGCACGGCCA GCCAGGATGT AGCCGACGCG
CGACGCCTCG TAGACAGTTG CATCGACCAC GGCGTCAACC TGTTCGACAC GGCGAACATG
TACTCCACCG GGCTGTCCGA AGAGATCCTC GGCGAGGTTT TGGAAGGCCG ATATGACGAT
ATCCTCGTGA CCTCCAAGGC GCGTATGCCC ATCGGCGATG GTCCGAACGA CGAAGGTGTC
TCGCGCTGGC ACCTGATCCG GGAATGCGAG CGTTCCCTCA AGCGGCTGCG CACCGACCAT
ATCGACATCT ACTACATGCA CGAATGGGAT GGTCTGACCC CTGTCGAGGA AAAGATGGAG
GCCCTCGATA CCCTGATCCG GCACGGCAAG ATCCGCTATG CAGGCTGTTC CAACTATTCG
GCCTGGCATG TGATGAAATC GCTGGCCGCT GCGCCGCGCC ATTCCAGCCG CTTCGTCACT
CAGCAAATTC ACTACACGAT CGAGGCGCGC GAAGCGGAAT ACGAGCTTCT GCCCCTGTCG
GTCGACCAAG GGCTGGGGGT TCTGGTCTGG TCGCCTCTGG CGGCCGGGCT GTTGTCGGGC
AAACACCGTC GCGGGAGGCA GGCGCCCGAA GGCTCGCGGC AGGCCGAGGG CTGGAACGAG
CCTCCGATCC GCGACATGGA AAGGCTCTGG AGCATCGTCG ATGTGTTGGT TGAGATCGCC
GAGGCCCATC AGGTCGAGGC AGCCCAGATC GCCCTGGCCT GGTTGCTGAC CCGGCCTGCG
GTAGCGTCCC TGGTCGTCGG CGGGCGGACG GTCGATCAGT TCGAGCGCAA CTTCCGCGCG
GTCGATGTCG TCCTGTCTGA GGATGAATTG AAGCGTCTTA ACGATGTCAG TCGCCTTCCG
CTGGTCTATC CGTACTGGCA CCAGCACAAC TTCGCCCGCC CGCGGTTCAG CCCCGCCGAC
CAGGCGTTGC ATGCCGATTA CCCGGACCGC CATTATGGCG GCGAAGACCC ATTGGTCTGA
 
Protein sequence
MKYRTLGRSG LKISVITMGT FTFGGRGDFG RTASQDVADA RRLVDSCIDH GVNLFDTANM 
YSTGLSEEIL GEVLEGRYDD ILVTSKARMP IGDGPNDEGV SRWHLIRECE RSLKRLRTDH
IDIYYMHEWD GLTPVEEKME ALDTLIRHGK IRYAGCSNYS AWHVMKSLAA APRHSSRFVT
QQIHYTIEAR EAEYELLPLS VDQGLGVLVW SPLAAGLLSG KHRRGRQAPE GSRQAEGWNE
PPIRDMERLW SIVDVLVEIA EAHQVEAAQI ALAWLLTRPA VASLVVGGRT VDQFERNFRA
VDVVLSEDEL KRLNDVSRLP LVYPYWHQHN FARPRFSPAD QALHADYPDR HYGGEDPLV