Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0515 |
Symbol | |
ID | 5711430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 498944 |
End bp | 499843 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641266417 |
Product | histidine kinase |
Protein accession | YP_001531862 |
Protein GI | 159043068 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.80747 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCGGT TCGATCTTGA TCAAGACCGC CTCCCGCCCG GCGCTGAGAT TCTATTTTAC GACCCCGGCG TCTGGGAGGA ATACTGGGCG GCAATCCTCC TGGCCTTCCC GATCATCCTC TTGCAGTCGA GCACAATCAT CGGCCTCGGC GTTCTGGAAA AGCGCCGTCG CCGTGCCGCG GCCGAGCTTG CCCAGCAGCG GGCGGAGGTC GCCCGGCTTT CGCGCGTGTC CCAACTGGGC GAGTTGTCCG GCGCGATCGC GCATGAGCTG AAGCAGCCCC TGACCTCGAT CCTGATGAAT GCGGAATCCG GCAGGGCCCT GTTACGACAA AGCCCGCCGG ATCTGCGTGA GATTGCCGAA ATCCTGGAAG ACATTGCCAA CGATGATCGG CGCGCGGCGG GTGTTATCGA CAACCTGCGC AAACTCCTTG GCGAGGGGGC CCCTGACTTC CAACCTGTCG AACTCAACGA CGTGGTGCGC GCGACCCTGC GCCTGATCCG GAGCGAGCTG ATCGCGCGGA GTGTCAGGAC AGATTTGAAA CTCTGCGAGG CTGCCCTGAT TGCGACAGGA AATGCGGAGC AACTTCAACA GGTTCTCTTG AACCTGATTT TCAACGCTAC AGATGGCATG GCGGATCAAC CGAGAAAGAC ACGGCGGATA AGCATCGAGA CGACACTGCG TACCGACGGC ATGCGCGAGG TGTCCGTCAC CGATACTGGC CCGGGCCTGC CCGAGGCCGT GCGGGACGCC GCTTTCCAAC CTTTCGTGAC GACCAAGGCG CATGGAATGG GCCTCGGGCT GTCGATCAGC CGGACGATTG CAGAGGCTCA TGGCGGTCAA CTCCACGTCG ACGGCGCGGC ATCGAAAACC CGCGCCATAC TGGCACTTCC AGCGCCATGA
|
Protein sequence | MQRFDLDQDR LPPGAEILFY DPGVWEEYWA AILLAFPIIL LQSSTIIGLG VLEKRRRRAA AELAQQRAEV ARLSRVSQLG ELSGAIAHEL KQPLTSILMN AESGRALLRQ SPPDLREIAE ILEDIANDDR RAAGVIDNLR KLLGEGAPDF QPVELNDVVR ATLRLIRSEL IARSVRTDLK LCEAALIATG NAEQLQQVLL NLIFNATDGM ADQPRKTRRI SIETTLRTDG MREVSVTDTG PGLPEAVRDA AFQPFVTTKA HGMGLGLSIS RTIAEAHGGQ LHVDGAASKT RAILALPAP
|
| |