| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0474 |
|---|
| Symbol | |
|---|
| ID | 5711390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 459481 |
|---|
| End bp | 460308 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641266378 |
|---|
| Product | S-formylglutathione hydrolase |
|---|
| Protein accession | YP_001531823 |
|---|
| Protein GI | 159043029 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0627] Predicted esterase |
|---|
| TIGRFAM ID | [TIGR02821] S-formylglutathione hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCGACC TGGTGGCAGA AAACCGGAGC TTTGGCGGAA CGCAGAAGGT GTTTTCGCAT
CGGTCCAGCA CGTGCAACTG CGATATGACA TTTGCCGCCT ACTTGCCGCC GCAGATTTCG
GAAGGTCCGG TGCCGGTTCT CTGGTACCTA TCGGGACTCA CGTGCACCCA TGAAAACGCC
ATGGTCAAAG GTGGGTTTCA GGAGCACGCG GCCAAGAACG GTATCGCCGT GGTGTTTCCC
GACACATCGC CGCGGGGCGA TGGGGTAGCC GATGACGACG CCTATGATCT GGGGCAGGGG
GCGGGGTTTT ACGTGAATGC CACTCGCGAT CCGTGGAAGC CCCATTTCCA GATGTATGAC
TATGTCCTGC AGGAATTACG TGGTATTGTC TTGGAAACCC TGCCGGTGCA GGACCGCCAC
GGAATTACCG GGCATTCGAT GGGGGGGCAT GGAGCGATTA CCATGGCCCT GCGTAACCCT
GACATGTTCA CGTCGCTGTC CGCCTTCGCA CCGATTTCGC ACCCGACTCA GTCCGATTGG
GGACGAAAGC AGCTTAGCGC TTATCTGGGT GATGACGAGG CGGCTTGGTC GGCGCACGAT
TCGACGATCC TGCTCAAGGA ACATGGATGG AAGGGCGATT TGCTGGTGGA TCAGGGGGCG
TCGGATCAGT TTCTGGACCT CTTGAAGCCA GAGGCTCTGG CAGAGGCCAT GATTGCCCGC
CGCCAACCCG GTCAGGTTCG TATGCAGGCG GGTTATGACC ACAGTTATTT CTTTGTGAGT
ACCTTCGCGC AGGACCACGT CGAGTGGCAT GCCGCACGTC TGAACTGA
|
|---|
| Protein sequence | MVDLVAENRS FGGTQKVFSH RSSTCNCDMT FAAYLPPQIS EGPVPVLWYL SGLTCTHENA
MVKGGFQEHA AKNGIAVVFP DTSPRGDGVA DDDAYDLGQG AGFYVNATRD PWKPHFQMYD
YVLQELRGIV LETLPVQDRH GITGHSMGGH GAITMALRNP DMFTSLSAFA PISHPTQSDW
GRKQLSAYLG DDEAAWSAHD STILLKEHGW KGDLLVDQGA SDQFLDLLKP EALAEAMIAR
RQPGQVRMQA GYDHSYFFVS TFAQDHVEWH AARLN
|
|---|
| |