Gene Dshi_0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0445 
Symbol 
ID5711361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp434046 
End bp434438 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content64% 
IMG OID641266349 
Producthypothetical protein 
Protein accessionYP_001531794 
Protein GI159043000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00422073 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGC ATCTTCGGAC CTATCGATTG CCAAGCGATT TGGCCGTGAC CGAGCAGGCG 
ACGGCGCTGG TCCGGTCGCT CGGAACCATC GCGGTGCTCC ACCGGGGCAT CGAAACCTCG
CCTGACCGCA TGAGCGATGC GGACCTGGTG CGGGCAACGT CCTTCGGGTG TGTGCATACC
CTCATGGTGG ATATCGACAG CATGGTTGCC AGCACGGTGT ACGAGACGAC AGGGGCTGTC
AGCTGCCGGC CAGAGGGCAT GGTGGGCGAT TACGGCGTGC GGGACGAGAT TGCCGGCCTC
GCCTTGCGGA CCGGCGCGCG GGTTCTTGCG GTGCGCGAAA AGGAGATTCC TAGCGGCAAA
CTTATCGCGG CAATCCTGCG ATGCTCGGTT TGA
 
Protein sequence
MPKHLRTYRL PSDLAVTEQA TALVRSLGTI AVLHRGIETS PDRMSDADLV RATSFGCVHT 
LMVDIDSMVA STVYETTGAV SCRPEGMVGD YGVRDEIAGL ALRTGARVLA VREKEIPSGK
LIAAILRCSV