Gene Dshi_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0392 
Symbol 
ID5711308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp382289 
End bp383437 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content57% 
IMG OID641266297 
Producthypothetical protein 
Protein accessionYP_001531742 
Protein GI159042948 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.375122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCAG AAATCCTCCA CGTCGGGTTT GACGGCCTGA AGGTTACCGT TCAGGCGGAT 
ATTCCATTGG CTCTACAGAA CCAATTCTCC CAAGCGAAGA CCCAGTGTCG AAAGACGAAC
AGTGAATGCA TCGTCCAGAT TGGCGACACA GCCTTCTCAA TGACACCAAA GGGAGCACGC
GGGTTTGCCT GCCATACCGG AGACCTTGGT GCTGTCTGGA TGTTCCAAGA TCCACTTGAT
CGGGTTCCTC ACAATCCGGG AATAATTGTC GACTTCCGCG CGTTCGGCCT GGCGACGGGT
GGGCTCGGTC AAGCAGAAGA CCACTTCCGC CGCGTGACTG AGGATCTCCG CATTCGATAC
TCGGATCAGC TCATGCGTAT CTCTCGCGTG GACGTCGCCG TGGACATGCT TGCGCCCTGG
TTTGAACCCG ACCGCACCGC TCTCGTTGTT CCACCAGGTA CCAAAGTCAC GGAGTATACC
GGGATTGATG AGACGGCCAC ACAAGCGACC GGCGCGCGCG TCACTGGCCT TCGTGCCGGA
GCAGTGAGCA ATCGCCAACT GGCGATCTAT GACAAGCGGC TGGAGGTGAT GAAGACAGGA
AAGCTGGGCT GGCTAGAGAT TTGGAACAAA ACGCGCAATA AGCAGGGGAA CGGTCCTCTA
AACTTGCGTG AGCGAGACAA GAGTCTGGTC TGGCGGTTTG AGCTGCGCCT TGGATCCAAA
CAACTCCGCA ATCAGTTCGA GCTCCACTCC TGGGATGATC TTCGCGCGGG TATCGGCGAC
GCCTATCGAG ACGCCTTTAG CCGCATACGC TACTGTTCAC CAACCCAAGA CACCAATCGC
TCGCGGTGGC CGTCACATGA GCTCTGGCGC AAGTTCTCGG ACACCGTGCA AGAGAACCTC
GCGGACCATA GTTGCGGCCT CGTGCCAACA GATATCATCT ACGCAAACAA GCTCGCCAAA
ATCCGCCAGC TAGATGCCCA ACTCATGGGC CTCTTTTTAA CACGCGCCGC GATCTCGGAT
GTGCAAGAGA CCGACCTACC AGCCTTCATG GAACGTCATG TTGAAGCTCT GCTTGAATAC
GCAAAGGACC ATCCCCAAAC CCTCGCTGAA CGGCTGCAGA AGGCTGGAAG CAAGTACCGC
TGGAATTGA
 
Protein sequence
MGAEILHVGF DGLKVTVQAD IPLALQNQFS QAKTQCRKTN SECIVQIGDT AFSMTPKGAR 
GFACHTGDLG AVWMFQDPLD RVPHNPGIIV DFRAFGLATG GLGQAEDHFR RVTEDLRIRY
SDQLMRISRV DVAVDMLAPW FEPDRTALVV PPGTKVTEYT GIDETATQAT GARVTGLRAG
AVSNRQLAIY DKRLEVMKTG KLGWLEIWNK TRNKQGNGPL NLRERDKSLV WRFELRLGSK
QLRNQFELHS WDDLRAGIGD AYRDAFSRIR YCSPTQDTNR SRWPSHELWR KFSDTVQENL
ADHSCGLVPT DIIYANKLAK IRQLDAQLMG LFLTRAAISD VQETDLPAFM ERHVEALLEY
AKDHPQTLAE RLQKAGSKYR WN