| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0354 |
|---|
| Symbol | azoR1 |
|---|
| ID | 5711263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 337582 |
|---|
| End bp | 338226 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641266252 |
|---|
| Product | FMN-dependent NADH-azoreductase 1 |
|---|
| Protein accession | YP_001531704 |
|---|
| Protein GI | 159042910 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAATT CTTGGTGCAC ACACCGAATA CCGGGCGCGG TTTTCGCCCT CCCCCCAACA
CACAGACAGG ATCGCTCCCA TGACCTCCGT TCTCCGCATC GACAGCTCCC CCCGCAGCAC
CAGCTCGGTC TCCCGCCAGC TCGGCGACCG CATCCTCGCC CGGCTCGGCG CGGCCCAGGT
CGTCTCCCGC GACATCACCG CCGGGCTTGC GGCGGTGGAT GCCGACTGGA TCGGCGCGAA
CTTCAGCGCA CGGCAGACCA GCGCGCGGTG CTGGCGCTGT CCGACAGCCT GGTGGCCGAA
CTGCAGGCCG CCGACACGGT CCTGATCACC CTGCCGATCT GGAACTTCGG CATCCCCTCG
ACGCTGAAAG CCTGGATCGA CCAGGTGGCG CGGGCGGGCG TGACCTTCCG CTATACCCCC
GACGGCCCCG TGGGGCTGCT GGAGGGCAAG CGCGCCATCC TGGCCGTGGC CTCCGGCGGC
ACCGAGGTCG GCAGCGCGAT CGACTTCGCC ACGGACTACC TGCGCCACGT GCTGGGCTTC
ATCGGCATTC ACGAGGTGGA AATCGTCGCC GCCGACCGGC TGATGGTCGA TGCAGATGCG
AGCCACGCCA AGGCCGACGC CGCCATCGAC GCCCTGGCCG CCTGA
|
|---|
| Protein sequence | MLNSWCTHRI PGAVFALPPT HRQDRSHDLR SPHRQLPPQH QLGLPPARRP HPRPARRGPG
RLPRHHRRAC GGGCRLDRRE LQRTADQRAV LALSDSLVAE LQAADTVLIT LPIWNFGIPS
TLKAWIDQVA RAGVTFRYTP DGPVGLLEGK RAILAVASGG TEVGSAIDFA TDYLRHVLGF
IGIHEVEIVA ADRLMVDADA SHAKADAAID ALAA
|
|---|
| |