| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0326 |
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| Symbol | engB |
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| ID | 5711576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 313718 |
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| End bp | 314371 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641266222 |
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| Product | ribosome biogenesis GTP-binding protein YsxC |
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| Protein accession | YP_001531676 |
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| Protein GI | 159042882 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0218] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCCC TGCCCTTCCC CCTCAGCCCC GAGCCCGACG CGCAAAGCCT TGAGGCCGGG
CGCAAGCTGT TCGCGGGCGA GGTCACCTTC CTCAAGGGCG TTGTGGCCAT GTCCGGCCTG
CCCCCGGCGG ACCGGCTGGA GGTCTGCTTC GCAGGCCGCT CGAACGTGGG CAAATCCTCC
CTGATCAACG CGCTGACCGG GCGCAAGGCG CTGGCGCGCA CCTCCAACAC GCCCGGCCGA
ACCCAGGAGA TCAACTATTT CTGCCTCGGC GAGGATCGCT ACCTTGTGGA TGTGCCCGGC
TACGGCTTTG CCGAGGCGCC CGTGGCGGTG GTGCAGAAAT GGCAGGCCCT GCTCAAGGCC
TACCTGACCG GGCGGCCCAC CCTGCGCCGC GCCTTCGTGC TGATTGATGC GCGGCACGGG
ATCAAGGCGG TCGATCACGA GATCATGTCC CTGCTCGACA CCGCCGCGGT CACCTTCCAG
GTGGTGCTGA CCAAGGCGGA CAAGATCAAG ACCGCCGAGC AGGACAAGAC CCTCGCCCAG
GTCCGCAAGG AGCTTGCCAG GCACCCCGCG GCCTTCCCCG AGCTTCTGCT GACCAGCTCG
GCCAAGGGCG ACGGGATCGA GACCCTGCGC GCCACCGTCG CCGGGCTGGT GTAG
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| Protein sequence | MTALPFPLSP EPDAQSLEAG RKLFAGEVTF LKGVVAMSGL PPADRLEVCF AGRSNVGKSS
LINALTGRKA LARTSNTPGR TQEINYFCLG EDRYLVDVPG YGFAEAPVAV VQKWQALLKA
YLTGRPTLRR AFVLIDARHG IKAVDHEIMS LLDTAAVTFQ VVLTKADKIK TAEQDKTLAQ
VRKELARHPA AFPELLLTSS AKGDGIETLR ATVAGLV
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