| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0307 |
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| Symbol | rpsM |
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| ID | 5711557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 297504 |
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| End bp | 297947 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641266203 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_001531657 |
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| Protein GI | 159042863 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.322221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGAGACCC CACGGGATTT TGGTTGTGAA AAAAGGTTCT GGCATGACGG AACCGCACCG
AAAAGGACAT ATGATTTGGC ACGTATTGCT GGCGTGAACC TGCCCACGGG CAAGCGCACC
CCCATCGCCC TCACCTACAT CACCGGGATC GGCCTGAGCT CCGCGCAAGC GATCTGCGAA
GCCGTGGGCA TCGAAGAGAG CCGCCGTCTG AACGAGCTGT CGGATGCCGA GATCCTTGCG
ATCCGTGAGC ATATCGACGC CAACTACACG GTCGAAGGCG ATCTGCGCCG CGAGACGCAG
ATGAACATCA AGCGTCTGAT GGACCTGGGC TGCTACCGCG GTCTGCGTCA TCGCCGCAAC
CTCCCCGTTC GCGGTCAGCG GACCCACACC AACGCACGCA CGCGCAAGGG CCCCGCAAAG
GCCATTGCCG GCAAGAAGAA GTAA
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| Protein sequence | METPRDFGCE KRFWHDGTAP KRTYDLARIA GVNLPTGKRT PIALTYITGI GLSSAQAICE
AVGIEESRRL NELSDAEILA IREHIDANYT VEGDLRRETQ MNIKRLMDLG CYRGLRHRRN
LPVRGQRTHT NARTRKGPAK AIAGKKK
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