| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0275 |
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| Symbol | rpsJ |
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| ID | 5711525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 278960 |
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| End bp | 279280 |
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| Gene Length | 321 bp |
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| Protein Length | 106 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641266171 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_001531625 |
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| Protein GI | 159042831 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATGG CCATCCAAAG CCAGAACATT CGCATCCGTC TCAAGGCGTT CGATTACCGT
GTGCTGGACG CCAGCACCCA GGAAATCGTC AACACCGCCA AGCGGACCGG TGCCCAGGTG
CGCGGGCCGA TCCCGCTCCC GAACAAGATC GAGAAGTTCA CGGTTCTCCG TGGTCCGCAC
GTGGACAAGA AGTCCCGCGA CCAATTCGAG ATCCGCACGC ACAAGCGTCT TCTCGACATC
GTCGATCCGA CCCCCCAAAC CGTGGACGCG CTGATGAAGC TCGACCTCGC GGCGGGTGTG
GACGTGCAGA TTTCGGTCTG A
|
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| Protein sequence | MTMAIQSQNI RIRLKAFDYR VLDASTQEIV NTAKRTGAQV RGPIPLPNKI EKFTVLRGPH
VDKKSRDQFE IRTHKRLLDI VDPTPQTVDA LMKLDLAAGV DVQISV
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