Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0262 |
Symbol | |
ID | 5712188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 258788 |
End bp | 259516 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641266158 |
Product | hypothetical protein |
Protein accession | YP_001531612 |
Protein GI | 159042818 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain [TIGR03370] variant PEP-CTERM putative exosortase signal, Roseobacter type |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGTAT TTGGAAAAGC GGGCATCGCC GCTGCGTCAA CCCTGGCCTT TGCGGCTTTC ATGGCGACCG GCGCGGCAGC TGCCCCAGTG ACCCTATTCA AACAGAACAA CGGCGACACG TTCAACGGCG GTGGGAACCT GCATGTGAAC GTCGCCAGCC CGACGGCCAA TGCCATGGCG GGCGGCTTCC GGCTCAAGGA TGGGGACGAC AACGCGTTCG TGGCGTGGTG CCTGGACATC ATGAACGATC TGGCCATCCC GGCCGGTGGC CAGCAGTACA ACACCACCAC GGCGCCGTTC ACCAATACCA CCGGCGCCCT GGATCCGGTG ACCCTGGCGA ATGTCGAAGG TCTCTTCGAG ACGGCGTACA GCTCGGTCGA CATCACCGAC AATGCGCAGT CGGCGGGCTT TCAACTGGCG CTTTGGGAAG TGCTGTATGA AACGGATGCC TCCTTCGATC TGACCGCGGG TACGTTCAGC CAATCGAAGT CCGGAAGCGC ACAGGACGAT GCCGAAGCGG CTGCGAACAG CTACCTCGCG TTGCTGGCAG GCGGGGTCGT GACGCAGGGC TACAACTTCA CCTACTACGA ATCCGGAACG ACGGGCACTG GCGATCAACT GAGCCAGAAC CTCGTCTCCG TGGCGCCGGT GCCGCTCCCG GCTGCGGCCT GGATGCTGGG TCTCGGTCTT GCAGGGCTCT ACGGGGCGCG GCGCCGCCGG AAAGCCTGA
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Protein sequence | MRVFGKAGIA AASTLAFAAF MATGAAAAPV TLFKQNNGDT FNGGGNLHVN VASPTANAMA GGFRLKDGDD NAFVAWCLDI MNDLAIPAGG QQYNTTTAPF TNTTGALDPV TLANVEGLFE TAYSSVDITD NAQSAGFQLA LWEVLYETDA SFDLTAGTFS QSKSGSAQDD AEAAANSYLA LLAGGVVTQG YNFTYYESGT TGTGDQLSQN LVSVAPVPLP AAAWMLGLGL AGLYGARRRR KA
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