Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0237 |
Symbol | pheT |
ID | 5712163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 234571 |
End bp | 236967 |
Gene Length | 2397 bp |
Protein Length | 798 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641266133 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_001531587 |
Protein GI | 159042793 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA CGCTCTCCTG GCTCAAGGAC CACCTTGAGA CCGACGCCAC CCTGGACGAG ATTCTCTACG CCCTGACCGA TCTCGGGCTC GAGGTCGAAG GGGTCGAGAA CCCCGCCGCC AAGCTGTCGG ATTTCGTGGT GGGCAAGGTG CTGCGGGCCG AAAAACACCC CGAGGCCGAC CGGCTCAAGG TCTGCCAGGT CGAATACGGC GACGGCCCCG TGCAGATCAT CTGCGGCGCA CCCAACGCGC GGGAAGGCAT CACCGTGGTC GTGGCCCGGC CCGGCGTTTA CGTGCCCGGC ATCGACACCA CCATCGGCGT GGGCAAGATC CGCGGCATCG AGAGCCACGG CATGATGGCC TCCGAGCGCG AACTGGAGAT GTCCGACGAG CATACGGGCA TCATCGAACT GCCCGAGGGC GAGATCGGCC AGAGCTTCCC GGACTGGCTC GCCGTCTACG ATCCTGCCCG CGTCGATCCG GTGATCGAGA TCGCCATCAC CCCGAACCGC CCCGACGCGC TGGGCGTGCG CGGCATTGCC CGAGATCTGG CCGCCCGCGG CCTCGGCACG ATGAAGGCCC GCGACGTCGC CCCGGTGCCC GGCGCCTTCC CTTGTCCGAT CACCGTCACC ATCGACGACG ACACAAGGGA CGCGGCCCCC GTCTTCTACG GCCGCCTGAT CCGCGGCGTC AAAAACGGCC CCTCGCCGGA CTGGCTGCAA ACCGCCCTGC GCGCCATCGG CCTGCGCCCA ATCTCGACCC TGGTCGATAT CACCAACTTC TTCACCTATG ACCGCAACCG GCCCCTTCAC GTCTTCGATG CCGACAAGGT CGCAGGTTGC CTGCGGGTCC ATGCGGCCAA GGGCGGCGAG ACTTTCACCG GGTTGGACGA GAAGGAATAC GTGCTCGCGC CCGGCATGAC GGCGATCTCC GACGACAACG GCGTCGAAAG CCTCGCGGGC ATCATGGGCG GCCTGCACTC CGGCTGCACC GAGGAAACCG TCAATGTCTT TGTCGAGGCG GCCTATTTCG ACCCGGTGCG CACCGCCTAT ACCGGCCGCG CGCTCAAGAT CAATTCCGAC GCGCGCTACC GGTTCGAGCG CGGGATCGAC CCGGCCTGGA CGCCCGAGGG GATGGAACAC GCCACCCGCA TGATCCTTGA CCTGTGCGGC GGCGAGGCCT CCGACGTGGT GGTCGCGGGT GCGCTGCCGG ATGTTGCCCG CGCCTACAAG CTCGATACCG ACCGGGTCCA GAGCCTCGTG GGCATGGACA TCGCCCCCGA GACCCAGCGC GCCACGCTGG AGGCGCTGGG CTTCACCCTG GAGGGCGACA TGGCCCATGT GCCGAGCTGG CGCCCGGATG TGATGGGCGA GGCCGATCTC GTCGAAGAGG TCGCCCGCAT CGCGTCACTC ACCAAGCTCC AGGGTCGCCC CCTGCCGCGC GCGTCCACCG GCGTGCCGAA GCCAGTCGTG ACCCAAGGCC AGCGGCGGCA AGCCCTGGCG CGGCGCACTG CGGCGGCGCT CGGGTACAAC GAGTGCGTGA CCTATTCCTT CATCGACCAG CCCACCGCGG CGCTCTTCGG CGGCGGCACC GAAGCCACCG AGCTGGAAAA TCCGATCTCC TCCGAGATGA GCCATATGCG CCCCGCTCTG CTGCCCGGTC TGATGCAGGC CGCTTCCCGC AACCAGGCGC GCGGCATCAT GGACCTGGCG CTCTTCGAGG TCGGCCCGGC CTTCCATGGC GGCGAGCCGG GCGAGCAGCA TACGCTGATC TCCGGCCTGC TGGTCGGGCG CACCGGGCCC AAGGACGTGC GCGGCGAAAG CCGCCCCGTA GACGTGTTCG ACGTCAAGGC CGATGCCGAG GCGATCCTCG CGGCCATCGG TGCCCCCGCC AAGGTGCAGA TCCTGCGCGG CGCCCAAGGC TGGTGGCACC CCGGTCGGCA CGGCAAGATC TGCCTTGGCC CCAAGAAGGT GCTCGGCGTA TTTGGCGAGT TGCACCCGCG CGTGGTGGCG GCCATGGATC TCAAGGGACC GGTGATGGGC TTTACCCTCT GGCCCGACGA GGTGCCGATG CCGCGCAAGA CCTCTGCCAC CCGGCCCGCG CTGGAGGCCC GCGACCTGCA GGCAGTCGAA CGCGATTTTG CCTTCGTGGT GGACGCGCAG GTGGAGGCGC TGGCGCTTAC CAACGCCGCC GCCGGGGCCG ACAAGACGCT GATCGAAGAG GTCCGCGTGT TCGACGAGTT CATCGGCGGC GCCTTGGGCG AGGGCAAGAA ATCGCTGGCC ATCACCGTGC GGCTGCAACC GACGGACGCC ACCCTGACCG AGAAAGAGAT CGAAGCGGTG GCTGCCCGGA TCGTGGCCAA GGTCGAAAAG GCCACGGGCG GCGTGCTGCG CGGCTGA
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Protein sequence | MKFTLSWLKD HLETDATLDE ILYALTDLGL EVEGVENPAA KLSDFVVGKV LRAEKHPEAD RLKVCQVEYG DGPVQIICGA PNAREGITVV VARPGVYVPG IDTTIGVGKI RGIESHGMMA SERELEMSDE HTGIIELPEG EIGQSFPDWL AVYDPARVDP VIEIAITPNR PDALGVRGIA RDLAARGLGT MKARDVAPVP GAFPCPITVT IDDDTRDAAP VFYGRLIRGV KNGPSPDWLQ TALRAIGLRP ISTLVDITNF FTYDRNRPLH VFDADKVAGC LRVHAAKGGE TFTGLDEKEY VLAPGMTAIS DDNGVESLAG IMGGLHSGCT EETVNVFVEA AYFDPVRTAY TGRALKINSD ARYRFERGID PAWTPEGMEH ATRMILDLCG GEASDVVVAG ALPDVARAYK LDTDRVQSLV GMDIAPETQR ATLEALGFTL EGDMAHVPSW RPDVMGEADL VEEVARIASL TKLQGRPLPR ASTGVPKPVV TQGQRRQALA RRTAAALGYN ECVTYSFIDQ PTAALFGGGT EATELENPIS SEMSHMRPAL LPGLMQAASR NQARGIMDLA LFEVGPAFHG GEPGEQHTLI SGLLVGRTGP KDVRGESRPV DVFDVKADAE AILAAIGAPA KVQILRGAQG WWHPGRHGKI CLGPKKVLGV FGELHPRVVA AMDLKGPVMG FTLWPDEVPM PRKTSATRPA LEARDLQAVE RDFAFVVDAQ VEALALTNAA AGADKTLIEE VRVFDEFIGG ALGEGKKSLA ITVRLQPTDA TLTEKEIEAV AARIVAKVEK ATGGVLRG
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