Gene Dshi_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0232 
Symbol 
ID5712158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp228403 
End bp229473 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content68% 
IMG OID641266128 
Producthypothetical protein 
Protein accessionYP_001531582 
Protein GI159042788 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCCGAA TAAGCGAACT CCACTACTCG AATGCGTACG CTCGACGGTC AGGCGAGCCG 
GAATTCCTCG AAGTCGCGCT CGACCCGTCC GAAAACCCGG CGGATTTCGT CGTTTCCTTC
TACCAGACCA GCGGTCAACT CGCGCTGGAG GTGCGGCTCG ACGATCCCGG CGTCACTGTG
ACCCGCGACC CCGAAACCGG CGAAGACGTC TACGTGATCT CGGAAACCGT CTTCATAGTC
CGGCTGACCG ACCCGGATTC CATCGGTCCT CGTAATACCG AAGCATTCGC CCTGACGAAC
ACGGCCACGG ATACGGTGAT CAACTTCTAT GACATCGGCG GTGGCAGAAC CGATATCGTG
GCCGATGGCG GCGCAGCGGA CGGGGCGGTC TCGACGAATA TCCCCGTGCC CACGGGGCCC
GTGGCCGCCA CCTATTCCAT CCAGTTCAAC AAGCCCGATC CCGATACGCC CGTCTACATT
CCCGTGACCC CGGGCGATAG CGGCGTCTGT TTCACTCCGG GCACCCTGAT CGACACGCCC
GACGGCCCGC GGATGGTGCA AGACCTGCGG CCCGGCGACC TGGTCTGGAC CCGGGATGCG
GGCGCGCAGC CCCTGCGCTG GGTCGGTGCT CGCACGGTTC CCGCGGCCGG TCCGCTGGCG
CCCGTGGCGA TCCCGGCGGG GATGTACGGG GCGACCGCGC CGCTTCTGGT GTCGCCGCAG
CACCGGATGC TGCTGACAGG CTGGCAGGCC GAACTGCTCA CCGGCACAGA CGAGGTGCTG
GTCGCGGCCC TGCACCTTGT CGATGGGGAC CGGGTCGTGC GGCGCCCCGG CGGGATGGTG
ACCTACATCC ATATCCTGTT CGACCGGCAT CACCTGGTGC GAGCCAACGG CGCCTGGTCC
GAAAGCTTCC ACCCCGGGGC TCAGGGGCTG GAGACCATGG ACGGCGCCGC CCGGGACGAA
CTGCTCGGCC TCTTCCCGGA GCTTCGCGAA AGCCCGGCCG CCTATGGCCC CAGCGCCCGG
CGCAGCCTGC GCGCCCATGA AGCGCAGCTT CTCCGCCTCC CATCCCGCTG A
 
Protein sequence
MARISELHYS NAYARRSGEP EFLEVALDPS ENPADFVVSF YQTSGQLALE VRLDDPGVTV 
TRDPETGEDV YVISETVFIV RLTDPDSIGP RNTEAFALTN TATDTVINFY DIGGGRTDIV
ADGGAADGAV STNIPVPTGP VAATYSIQFN KPDPDTPVYI PVTPGDSGVC FTPGTLIDTP
DGPRMVQDLR PGDLVWTRDA GAQPLRWVGA RTVPAAGPLA PVAIPAGMYG ATAPLLVSPQ
HRMLLTGWQA ELLTGTDEVL VAALHLVDGD RVVRRPGGMV TYIHILFDRH HLVRANGAWS
ESFHPGAQGL ETMDGAARDE LLGLFPELRE SPAAYGPSAR RSLRAHEAQL LRLPSR