| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0214 |
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| Symbol | hbdA |
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| ID | 5712139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 212131 |
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| End bp | 213006 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641266109 |
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| Product | 3-hydroxybutyryl-CoA dehydrogenase |
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| Protein accession | YP_001531564 |
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| Protein GI | 159042770 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCA AGTCGGTGGG CGTGATCGGC GCCGGGCAAA TGGGAAATGG CATCGCCCAT
GTTTTTGCAG TTGCCGGGTT CGACGTCATG ATGACCGACA TATCCCAGGA CGCGCTGGAC
CAGGCCATGG CGCTGATCCG GCGAAACCTG GAACGGCAGG TCAGCCGCGA GAAGATCAGC
CGTGAAGACA TGGAAACCGC CATGGCGCGG ATCACCACCA CCCTGAAGCT GCCGGAACTG
GGCCAGACCG ACCTGGTCAT CGAAGCCGCG ACGGAACGGG AAACGGTCAA ATCCGCGATC
TTCGAGGACC TGCAACCGCA TCTGAAACCC GAGACGATCC TGACCTCGAA CACCTCTTCG
ATTTCGATCA CCCGGCTGGC AAGCCGCACG GACCGGCCCG AGCGGTTCAT GGGATTTCAC
TTCATGAACC CGGTGCCGGT GATGCAATTG GTGGAACTGA TTCGCGGCAT CGCGACGGAT
GAGGCGACCT ACAAGACGCT GCTGGGCGTG GTCGAAAAGC TGGGCAAGAC GGCTGCGAGC
GCCGAGGATT TCCCCGCCTT CATCGTGAAC CGGATCCTGA TGCCGATGAT CAACGAGGCG
GTATATACGC TCTACGAGGG CGTCGGCTCC GTGCGGTCGA TCGACGAGTC GATGAAACTG
GGCGCGAACC ACCCCATGGG GCCGCTGGAG TTGGCGGATT TCATCGGGCT GGACACCTGC
CTTGCGATCA TGAACGTGCT CCATGACGGG TTGGCGGACA CCAAGTACCG CCCCTGCCCG
CTGCTGACGA AATATGTCGA GGCCGGCTGG CTCGGGCGCA AGACACAGCG GGGCTTCTAC
GACTACCGCG GCGAGGTGCC GGTTCCGACC CGCTGA
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| Protein sequence | MDIKSVGVIG AGQMGNGIAH VFAVAGFDVM MTDISQDALD QAMALIRRNL ERQVSREKIS
REDMETAMAR ITTTLKLPEL GQTDLVIEAA TERETVKSAI FEDLQPHLKP ETILTSNTSS
ISITRLASRT DRPERFMGFH FMNPVPVMQL VELIRGIATD EATYKTLLGV VEKLGKTAAS
AEDFPAFIVN RILMPMINEA VYTLYEGVGS VRSIDESMKL GANHPMGPLE LADFIGLDTC
LAIMNVLHDG LADTKYRPCP LLTKYVEAGW LGRKTQRGFY DYRGEVPVPT R
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