| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0213 |
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| Symbol | pckA |
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| ID | 5712138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 210410 |
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| End bp | 212008 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641266108 |
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| Product | phosphoenolpyruvate carboxykinase |
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| Protein accession | YP_001531563 |
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| Protein GI | 159042769 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1866] Phosphoenolpyruvate carboxykinase (ATP) |
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| TIGRFAM ID | [TIGR00224] phosphoenolpyruvate carboxykinase (ATP) |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATG GACGGGTGAA TCCAACTTTC ACGTTGGAGG ATCAGGGTAT CAACGGGCTG
GGCGCAGTCC ACTATAACCT GATCGAGCCT GCGCTGATCC AGGAAGCGCT CAAACGCGAG
GAAGGCACGC TGGGCAAGGG CGGTGCGTTC TTGGTCGAGA CGGGCAAGTA CACCGGCCGC
TCCCCCAAGG ACAAGCACGT GGTCAAGACT CCTTCCGTGG CGGACACGAT CTGGTGGGAC
AACAATGCCG AGATGTCCTC CGAGGGCTTC GACGCGCTGT ATGCGGATAT GCTCGCCCAC
ATGAAGGGCA AGGAATATTT CGTTCAGGAC CTTTTCGGGG GGGCCGATCC GGCGCACCGC
CTCGATGTGC GCGTGATCAC CGAGCTCGCG TGGCACGGGC TGTTCATCCG CCACATGCTG
CGCCGTCCGG AGCGGGGCGA ACTCGACAGT TTCACCGCGG ATTTCACGAT CATCAACTGC
CCGAGCTTCA AGGCCGACCC GGCCAAGCAT GACTGCCGGT CCGACACGGT GATCGCGCTG
AATTTCGACC GCAAGCTGAT CCTGATCGGC GGGACGGAAT ATGCCGGCGA GAACAAGAAA
TCGGTCTTTA CGCTGCTGAA CTACATGCTG CCCGAGAAGG GGATCATGCC AATGCATTGC
TCGGCCAATC ACGCGGTCGG CAATCCGGTG GACACCGCGG TATTCTTCGG CCTCTCGGGC
ACCGGCAAGA CGACCCTGTC GGCGGATCCC GAACGGGTCC TGATCGGCGA TGACGAGCAT
GGCTGGTCCG AGCGCGGCAC CTTCAACTTC GAAGGCGGCT GCTACGCCAA GACGATCAAT
CTGAGTGCCG AAGCCGAGCC GGAGATCTAC GCCACGACCG AGATGTTCGG CACCGTGATC
GAGAACATGG TGTTCGATCC CGAAACGCTG GACCTGGATT TCGAGGATGA CAGCCTGACG
GCGAACATGC GCTGCGCCTA TCCGCTGAAC TACATATCGA ACGCGTCCGA GACAGCGCTT
GGCGGGCATC CCAAGAACAT CATCATGCTG ACCTGTGACG CGTTTGGCGT GTTGCCCCCG
ATTTCGCGGC TGACCCCGGC GCAGGCGATG TATCATTTCC TGTCGGGCTT CACCTCCAAG
GTGGCGGGGA CAGAGCGGGG CGTGACCGAG CCGGAGCCGA CCTTTTCGAC CTGCTTCGGG
GCACCCTTCA TGCCGCGGCG GCCCGAGGTC TACGGCAAGC TCCTGCAGGA GAAGATCGCC
AAGCATGGCG CGACCTGCTG GCTGGTGAAC ACCGGTTGGA CCGGCGGCGC CTATGGCACC
GGGTCGCGGA TGCCGATCAA GGCGACCCGA GCGCTGCTGA CCGCGGCGCT GGATGGCTCG
CTGGCCGATG CCACCTTCCG CAAGGACGCG AATTTCGGCT TCGATGTGCC GGTGACGGTG
CATGGGGTCG ATGCCACGCT TCTGGATCCC AGGGGCACCT GGGAGGACAG CGCCGCCTAT
GATGCACAGG CGCAGAAGCT GGTGGAGATG TTCGCGGAGA ATTTCGCGCA ATACGTGCCT
TATATCGACG AGGACGTGAA AGCGGTCGCC ATCGGCTGA
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| Protein sequence | MANGRVNPTF TLEDQGINGL GAVHYNLIEP ALIQEALKRE EGTLGKGGAF LVETGKYTGR
SPKDKHVVKT PSVADTIWWD NNAEMSSEGF DALYADMLAH MKGKEYFVQD LFGGADPAHR
LDVRVITELA WHGLFIRHML RRPERGELDS FTADFTIINC PSFKADPAKH DCRSDTVIAL
NFDRKLILIG GTEYAGENKK SVFTLLNYML PEKGIMPMHC SANHAVGNPV DTAVFFGLSG
TGKTTLSADP ERVLIGDDEH GWSERGTFNF EGGCYAKTIN LSAEAEPEIY ATTEMFGTVI
ENMVFDPETL DLDFEDDSLT ANMRCAYPLN YISNASETAL GGHPKNIIML TCDAFGVLPP
ISRLTPAQAM YHFLSGFTSK VAGTERGVTE PEPTFSTCFG APFMPRRPEV YGKLLQEKIA
KHGATCWLVN TGWTGGAYGT GSRMPIKATR ALLTAALDGS LADATFRKDA NFGFDVPVTV
HGVDATLLDP RGTWEDSAAY DAQAQKLVEM FAENFAQYVP YIDEDVKAVA IG
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