Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0173 |
Symbol | cobL |
ID | 5711641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 176787 |
End bp | 177989 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641266068 |
Product | decarboxylating precorrin-6Y C(5,15)-methyltransferase |
Protein accession | YP_001531523 |
Protein GI | 159042729 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2241] Precorrin-6B methylase 1 [COG2242] Precorrin-6B methylase 2 |
TIGRFAM ID | [TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit [TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0402881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGC CGTGGTTGCA TATCGTCGGC ATCGGTGAGG ACGGAATGGC CGGGCTTCTG CCGGCCACCC GGGCTGTGGT CGAGGCCGCC GAGGTCATCG TCGGCGGGGA GCGGCACCAC CAGCTCTCCG CCAGCGTCAC GGCCGAGCGG ATCGCCTGGC CGCACCCGTT CGACGCGCTG ATCGACACCC TGACCGGGCT CGCCGGGCGG CGGGTCGTCG TGCTGGCCAC GGGCGATCCC CTTTGGTTTT CCGTCGGCGC GCGGATCGGG CGGGCGATCC CGCCGGGCGA GATCACCTAT CATCCGCAGC TTTCGGCTTT CCAGCTGGCC GCGGCGCGCA TGGGCTGGAG CCTGGCGGAT GTGGAAACCC TCACCGTCCA TGGCCGCCCC GTCGAGCAGA TGATCGCCTT CATCCAGCCC GACCAGCGGC TCCTGATCCT GACCACCGGG GCCGAGACCC CGGCGCAGAT CGCGCAGTTT TTGACCGAGC GCGGCTTCGG GCAGTCGCGC ATGACCGTGC TCGCCGCCAT GGGGGGGGGC GACGAGGCCC GGTTCGACGG TGTGGCCGAG ACCTGGGACC ACGTTGTGCC GCCGTTCAAC ACGCTGGCGG TCGAGTGCAT CGCCGCCCCG GATTGCGCGC TGCTGCCCCG GGTGCCGGGG CTGGCGGATG ACCTTTTCAC CCATGACGGC ACCATGACCA AGCGCGAGGT CCGCGCGGTC ACGCTGGCCA AGCTGATGCC CATGCGCGGG GCGCTGTTGT GGGATGTGGG CACCGGCTGC GGCTCGGTCG CGGTGGAATG GATGCGCGGC GCGCGGTATG CCCGCGCCAT CGGGATCGAG CCGCGCGCGG ACCGCCGTGC CATGGCGGCG GCCAATGCGC TGGCCCTTGG CGTGCCGAAA CTGCAGGTGA TCGAGGGTAC GGCGCCGGGC GCCTTTGCGG GTCTGGAAGC GCCCGATGCG ATCTTTCTCG GCGGGGGCCT GAGCGCCGAG GTGTTCGATG CGGCCTGGGC CGCCCTCCGC CCGCTGGGGC GGCTGGTGGC CAATGCCGTG ACCATCGAGA GCGAGCAGGT GCTGGTGGCG CTTCACAAGA CCCATGGCGG GGAGCTGTCC AAGCTGTCGG TGCAGCGCGC GGATGCGGTG GGCCCGCGCC TCGGCTGGCG GCCCTTCATG CCGGTGACCC AGTGGAGCCT GATCAAGCGA TGA
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Protein sequence | MTAPWLHIVG IGEDGMAGLL PATRAVVEAA EVIVGGERHH QLSASVTAER IAWPHPFDAL IDTLTGLAGR RVVVLATGDP LWFSVGARIG RAIPPGEITY HPQLSAFQLA AARMGWSLAD VETLTVHGRP VEQMIAFIQP DQRLLILTTG AETPAQIAQF LTERGFGQSR MTVLAAMGGG DEARFDGVAE TWDHVVPPFN TLAVECIAAP DCALLPRVPG LADDLFTHDG TMTKREVRAV TLAKLMPMRG ALLWDVGTGC GSVAVEWMRG ARYARAIGIE PRADRRAMAA ANALALGVPK LQVIEGTAPG AFAGLEAPDA IFLGGGLSAE VFDAAWAALR PLGRLVANAV TIESEQVLVA LHKTHGGELS KLSVQRADAV GPRLGWRPFM PVTQWSLIKR
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