| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0160 |
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| Symbol | cobW |
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| ID | 5711628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 162047 |
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| End bp | 163126 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641266055 |
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| Product | cobalamin biosynthesis protein CobW |
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| Protein accession | YP_001531510 |
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| Protein GI | 159042716 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0523] Putative GTPases (G3E family) |
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| TIGRFAM ID | [TIGR02475] cobalamin biosynthesis protein CobW |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.765545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCAA AGATCCCCGC CACGGTCGTC ACCGGCTTTC TCGGCGCCGG CAAGACCACC
CTGATCCGCC ACATGCTCGC CAATGCGAAC GGCAAGCGGA TCGCCCTGAT CATCAACGAG
TTCGGCGATC TCGGGGTCGA TGGCGACATC CTCAAGGGCT GCGGGGACGA AACCTGCAGC
GAGGATGACA TCATGGAACT CAGCAATGGC TGCATCTGCT GCACCGTGGC CGACGACTTC
ATTCCGACCA TGGAAAAGCT GCTCGCCCGC GAGACCCCGC CCGATCATAT CGTGATCGAA
ACCTCCGGTC TCGCCCTACC GCAGCCCCTG GTGCGAGCCT TCAACTGGCC CGGGATCTCG
ACCAAGGTGA CCGTGGACGG GGTCGTCACC GTGGTCGATG GCAAGGCCGT GACCGAGGGC
CGCTTTGCAC ATTCCGTGGC CGCCGTGGAC GCCCAGCGCA AGCTGGACGA GAACCTCGAC
CACGAGACAC CCCTGTCGGA GCTGTTCGAG GATCAGGTCG CCTGCGCCGA CATGCTGGTG
GTCAACAAGA CCGACCTGCT GACCCCGGCC GAGGCCGAGG CGCTGACCGA GCGGCTGAAA
TCCGAGGCCC GCGGCGGGGT TCAGGTGGTC CGCGCCACCC ATGGCGCGCT GCCGGTGGAT
GTGTTGCTGG GCCAGGGCAT CGGGGCGGAG CACGATCTGG AGGCCCGCAG CGAGGTCCAC
CATCACCACC ACCATGATCA CGACGATCAC GACGACGATC ACCATGACGA CCACCCCCAC
CATGACCACG ACCACGACGC CTTCACGTCC TTCGTCGTCA CCCTGCCGGA AATCACCGAG
CCGGACGCCT TCGCGGCCCA TGTCGCGCGC GTGATCGCCG ATCACGACAT CCTCCGGTTG
AAGGGGTTCG CGGCCGTGGC GGGCAAACCC ATGCGCCTGA CCCTGCAAGC GGTCGGGCCG
CGGATAGAGA CCTATTTCGA CCGCCCCCTC GGCGCGGACG AGACGCGCGA GACGCGCCTG
GTGGTCATCG GACAGGCCGG GCTGGACAGC GTGGCGATCG CGGCAGCGCT GGCTGCGTAA
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| Protein sequence | MPAKIPATVV TGFLGAGKTT LIRHMLANAN GKRIALIINE FGDLGVDGDI LKGCGDETCS
EDDIMELSNG CICCTVADDF IPTMEKLLAR ETPPDHIVIE TSGLALPQPL VRAFNWPGIS
TKVTVDGVVT VVDGKAVTEG RFAHSVAAVD AQRKLDENLD HETPLSELFE DQVACADMLV
VNKTDLLTPA EAEALTERLK SEARGGVQVV RATHGALPVD VLLGQGIGAE HDLEARSEVH
HHHHHDHDDH DDDHHDDHPH HDHDHDAFTS FVVTLPEITE PDAFAAHVAR VIADHDILRL
KGFAAVAGKP MRLTLQAVGP RIETYFDRPL GADETRETRL VVIGQAGLDS VAIAAALAA
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