Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0105 |
Symbol | |
ID | 5711728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 104539 |
End bp | 105249 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641266000 |
Product | hypothetical protein |
Protein accession | YP_001531455 |
Protein GI | 159042661 |
COG category | [S] Function unknown |
COG ID | [COG1432] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00288] conserved hypothetical protein TIGR00288 |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCAAATC GCGACCGTCC CCTGCTTGCC GTTCTGATCG ACGCCGACAA CGTGCCCGCC AAATTCGCCG AAGCGATCCT GAAAGAGGTC GCCTCGATCG GCGAGCCTGC GTTGCGCCGG GTCTATGGCG ACTGGTCCAG CGGGCGTCTG CGCAACTGGG CGGACAAGGT CCTGAGCCTG GGGCTGGTGG CCCATCAGGA CACTGCCAAT ACCACGGGCA AGAATGCCTC CGACATCGGG TTGGTGATCG ACGCCATGGA TATCCTGCAC GGCGGGCGGT TCGACGGCTT CGTTCTGGTC AGCTCCGACA GCGATTTCAC CAGCCTCGCC AACCGGCTGC GCGAAGATGG CAAGGAGGTG ATCGGCATCG GCGAGAAGAA AGCCCCCGAA AGCCTGCGCA ATGTCTGCAA TCGGTTCATA TTCATAGAGA ATATCGTGCA GGCCGGGCCG GATGCGGCCG GGTCTGGCAA GGCCGCCCCG CAGGAGCAGA TCACCGACGC GGTGCCGCTG ATCCTGAACG CCATGGACGA GATCAACCAG GACGACGAAT GGTATCCGCT GGGTCAGCTC GGCCAGTATA TCGTCGCGGT GAACCCCGAT TTCGACACGC GCAGTTACGG TCACCGCAAA CTCAGCAGCC TGATCGGAGA GCTCAAGCGC TTCGAGACCA AGAAGGTGGG CAACCAGTTG ATGGTCCGGC GCCTCGACTA G
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Protein sequence | MPNRDRPLLA VLIDADNVPA KFAEAILKEV ASIGEPALRR VYGDWSSGRL RNWADKVLSL GLVAHQDTAN TTGKNASDIG LVIDAMDILH GGRFDGFVLV SSDSDFTSLA NRLREDGKEV IGIGEKKAPE SLRNVCNRFI FIENIVQAGP DAAGSGKAAP QEQITDAVPL ILNAMDEINQ DDEWYPLGQL GQYIVAVNPD FDTRSYGHRK LSSLIGELKR FETKKVGNQL MVRRLD
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