Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0079 |
Symbol | |
ID | 5711702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 78091 |
End bp | 78972 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641265974 |
Product | lipid A biosynthesis acyltransferase |
Protein accession | YP_001531429 |
Protein GI | 159042635 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0319084 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCC GCGCGCGCCT CTCCTACCTG ATCAGTTTCG CACCGATCTA TGTGTTCCTG AAGCTGGCCC GGCTGGTGCC GTTCCGGCGT CGGGTGGCGC TGGGCGGGGC GCTGGCCGGG CTGGCCTTGC GTCACTTCCC CCCGGCGCGC AAACGGGTGA TGGCCAATCT CGCGCGGATC TATCCCGATA TGGCGCCGGA AGCCGCGCGC GCCCGGTGTC GCGCCATCGG GCGGCAATTG GGGCGGACCC TGACCGAGAT CCTGTTCGGG ACCGAACATC AGACAAAGCA TTTGCCATTC ACTGTCTCTG GCCCGGGGCT GGAGGCGATC CGGGCCGCCC ATGCCGCGGG CAAGCCGATC CTGCTGGTCA GTGCGCATTT CGGGCAGTGG GACGCGGCGC GCATCTATTT GCGGGATACT CTCGGGATCG AGGTCGGCGC GCTCTACCGG CCCAACAACA ACCCCTATTA CGAGCCTTAC CTGGCCGAGG GGGCAGCCGC GTCCGGAACA CCGCTCGTGC CCAAGGGCAA TGACGGGTTT CGCATGCTCC TGCGGCACCT CAAGGGGGGT GGTGCCTTTG CGATCATGGC GGATCAGTAT CATTTTACCG GCGCTGTGCT GCCCTTCATG GGGGCGGACG CGCGCACCGC CCTGACCCCA GCGGAGTTGG CCCTGCGCTA CAAGGCGCCG CTGGTGCCGT GCTTTGGTAT TCGGCGCGAC GCGGAGGGGC GGATCGACGT GGTGTTCGAG GCGCCGATCG AGGGCGAGAC GCCCGAAGAG ATGATGCGCG CTTTCAACGA CCGGGCCACC GCGCGGATCG AGGCCGACCC GGACCAGTGG CTCTGGCCGC ATCGGCGGTG GAAGGGGATG GAGGGCGGCT AA
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Protein sequence | MTRRARLSYL ISFAPIYVFL KLARLVPFRR RVALGGALAG LALRHFPPAR KRVMANLARI YPDMAPEAAR ARCRAIGRQL GRTLTEILFG TEHQTKHLPF TVSGPGLEAI RAAHAAGKPI LLVSAHFGQW DAARIYLRDT LGIEVGALYR PNNNPYYEPY LAEGAAASGT PLVPKGNDGF RMLLRHLKGG GAFAIMADQY HFTGAVLPFM GADARTALTP AELALRYKAP LVPCFGIRRD AEGRIDVVFE APIEGETPEE MMRAFNDRAT ARIEADPDQW LWPHRRWKGM EGG
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