Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0057 |
Symbol | leuS |
ID | 5711679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 53250 |
End bp | 55859 |
Gene Length | 2610 bp |
Protein Length | 869 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641265951 |
Product | leucyl-tRNA synthetase |
Protein accession | YP_001531407 |
Protein GI | 159042613 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0495] Leucyl-tRNA synthetase |
TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000000000544837 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCGCCG ACACGCCCGC CGGTTCCGCC CCCGCCCGCT TCGACCCCGC CCAGATCGAG CCGAAATGGC GCGCCGCCTG GGATCTGGCC GGCACCTTCA CCGCGACCCC GGACCCAGCG AAGCAGAAAT ACTACGTGCT CGAGATGTTC CCGTATCCCT CGGGCCGCAT CCACATGGGC CATGTGCGCA ACTACACGAT GGGCGACGTG ATCGCGCGCT ACAAGGCCTC CTGCGGCTTC TCGGTCCTGC ATCCCATGGG CTGGGACGCC TTCGGCATGC CCGCCGAAAA CGCCGCCATG GCCACGGGCG GCCACCCCAA GGACTGGACC TACGCCAACA TCGCCGAGAT GCGGGCGCAG ATGAAACCGC TGGGCCTCAG CATCGACTGG TCGCGCGAAT TCGCCACCTG CGACGAGGCC TATTACGGCC AGCAACAATC CATGTTTCTC GACTTCCTGG AAAAGGGCCT GGTCTATCGC AAGAACGCCG TGGTCAACTG GGATCCCGTG GACATGACCG TGCTCGCCAA CGAGCAGGTG ATCGACGGCA AGGGCTGGCG CTCCGGCGCC GAGGTCGAGC GTCGCGAGCT GACCCAATGG TTCTTCAAGA TCTCCGACTT CGCCGACGAC CTGCTGAGCG CGCTGGACGG GCTGGAGAAC TGGCCCGAAA AGGTCCGCCT GATGCAGGCC AACTGGATCG GTAAGAGCCG CGGGCTGGAG TTTGCCTTCG CGCGCACCGA TGGCGGCGAC CCGATCCCGG TCTACACCAC CCGGCCCGAC ACCCTGATGG GCGCCAGCTT CGTGGGCATC TCGCCGGGCC ATCCCATCGC CAAGGCGCTC GCAGCCCAGC GCCCCGAGGT CGCCGATTTC CTGGCCGAGG TCGCGCGCGG CGGCACCACC GAGGCAGCAC TTGAGACCGC GCCGAAACTC GGCTTCGACA CCGGGATCAC GGTGCGCCAT CCGCTGGACC CGAACTGGGA GCTCCCAGTC TGGATCGCCA ATTTCATCCT GATGGATTAC GGCACCGGCG CGATCTTCGC TTGCCCGGCC CATGACCAGC GCGACCTGGA TTTCTGCCGC AAATACGACC TGCCGGTGAT CGACACCTTC TTCGCTCTCG ACGACCCGAC GCCCGTGGGC GACACCGCCT TCGTGCCGCC GAAAACCGAA CCCGTCCGCT GGGTCGAGCA TTTCGCCGGG CTAGACATCG CCACCGGGCA GGAGGCGATC GAGGCCACCA TCGACTTCGC CGAGGCCGCG GGCTGGGGTC GGGGTGTCGA GCAGTTCCGC CTGCGCGACT GGGGCCTGAG CCGTCAGCGC TACTGGGGCT GCCCGATCCC GGTCGTCCAT TGCGACAAAT GCGGCGTGGT GCCCGAGCGC AAGGAAAACT TGCCCATCGC CCTGCCCTAT GACGAAGACG GGCGGCCCAT CGACTTCTCG ATCCCCGGCA ACCCGCTGGA CCGGCACCCG TCCTGGCGCG ACTGCGCCTG CCCGGCCTGC GGCGCCCCCG CCCGGCGCGA AACCGACACC ATGGACACCT TCGTCGACAG CTCCTGGTAC TTCGCCCGCT TCACCGCCCC CCGGGCCGAG ACCCCCACCG ACCCGGCCGA GGTCGGCTAT TGGATGAACG TGGACCAGTA TATCGGCGGG GTCGAACACG CGATCCTGCA CCTGCTCTAT TCACGCTTCT TCGCCCGGGC GATGCATCTC TGCGGCCACC TGCCCGAAAG CGCGCGCGAA CCCTTCGACG CGCTCTTCAC GCAAGGCATG GTGACCCACG CGATCTACAA GACCACCGGC ACCGATGGCC GCCCGGTCTA TCACTACCCC GAGGAGGTCG AAACGACCGA GGAGGGCGCC GTCCTGAAAA AGACCGGTGC GCCGGTGGAT ATCGTGCCGT CGGCCAAGAT GTCGAAATCC AAGAACAACG TGGTCGACCC GCTCGCGATC ATCGACGCCT ACGGGGCCGA TACCGCGCGC TGGTTCGTGA TGTCCGACAG CCCGCCGGAG CGTGACGTGG AATGGACCGC CTCGGGCGCC GAGGCCGCCT TCAAGCACCT CGGAAGGGTC TGGCGTCTGG CTGAGGATCT GCGCCGGAAC GCCGAGGAGG CCGCGACCGC AGGAAGCGCC GAGGAGGCGC GCGCCCTGGC GCGCGCCTCC GCCCGCGCCA TCGCCGAGGT CACCGCCGGG ATCGAAGGCT TCGCCTTCAA CAAATCCGTG GCCAAGCTCT ACGAATTCAC CAACACGATC CAGAAATCCA AGGCCCCCCG CGCCGAAAAG CGCGCTGCCC TGAAAACCAT GGCGCAGCTG ATGTCGCCCA TGACGCCCCA CCTCGCCGAA GAGGTCTGGT CGATGCTCGG CGGCATCGGC CTGGTGGCCG AGGCGCCCTG GCCCGAAGCC GACCCGGCGC TGCTCGTCGA AGACACCGTC ACCCTGCCGA TCCAGATCAA CGGCAAGCGC CGCTCCGAGC TGGCCGTGCC CAAGGACATG CCCCGGGAAG AGGTCGAGAA ACTGGCGCTG GCGGACGCGG CCGTGCTCAA GGCGCTCGCC GGGGGCGCGC CCCGGAAACT CATCGTCGTG CCGGGCCGGA TCGTGAATGT CGTCATTTGA
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Protein sequence | MPADTPAGSA PARFDPAQIE PKWRAAWDLA GTFTATPDPA KQKYYVLEMF PYPSGRIHMG HVRNYTMGDV IARYKASCGF SVLHPMGWDA FGMPAENAAM ATGGHPKDWT YANIAEMRAQ MKPLGLSIDW SREFATCDEA YYGQQQSMFL DFLEKGLVYR KNAVVNWDPV DMTVLANEQV IDGKGWRSGA EVERRELTQW FFKISDFADD LLSALDGLEN WPEKVRLMQA NWIGKSRGLE FAFARTDGGD PIPVYTTRPD TLMGASFVGI SPGHPIAKAL AAQRPEVADF LAEVARGGTT EAALETAPKL GFDTGITVRH PLDPNWELPV WIANFILMDY GTGAIFACPA HDQRDLDFCR KYDLPVIDTF FALDDPTPVG DTAFVPPKTE PVRWVEHFAG LDIATGQEAI EATIDFAEAA GWGRGVEQFR LRDWGLSRQR YWGCPIPVVH CDKCGVVPER KENLPIALPY DEDGRPIDFS IPGNPLDRHP SWRDCACPAC GAPARRETDT MDTFVDSSWY FARFTAPRAE TPTDPAEVGY WMNVDQYIGG VEHAILHLLY SRFFARAMHL CGHLPESARE PFDALFTQGM VTHAIYKTTG TDGRPVYHYP EEVETTEEGA VLKKTGAPVD IVPSAKMSKS KNNVVDPLAI IDAYGADTAR WFVMSDSPPE RDVEWTASGA EAAFKHLGRV WRLAEDLRRN AEEAATAGSA EEARALARAS ARAIAEVTAG IEGFAFNKSV AKLYEFTNTI QKSKAPRAEK RAALKTMAQL MSPMTPHLAE EVWSMLGGIG LVAEAPWPEA DPALLVEDTV TLPIQINGKR RSELAVPKDM PREEVEKLAL ADAAVLKALA GGAPRKLIVV PGRIVNVVI
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