| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0048 |
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| Symbol | |
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| ID | 5711670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 47483 |
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| End bp | 48445 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641265942 |
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| Product | putative transposase |
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| Protein accession | YP_001531398 |
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| Protein GI | 159042604 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000000000122957 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCACAGC ACTTCCTCCT TTCGGCGGCA TCCCGCACCC TCAGCCTTCG CTCGATCTAC
AAGGCGGGCG AGGATGCGGC TTACAACGTG TTCTGCGAAA TGCGCTGGCC TGAGACCAAT
GGCGAGGCTG TGTGCCCCCG CTGCTCTCAC GGTGAAACCT ACTCGATCAG CACGCGCCGC
AAGTTCAAGT GCAAGAACTG CCACCACCAG TTCAGCGTCA CGTCTGGCAC CATCTTTGCC
AGTCGGAAGA TGGACTTTGT CGACCTGCTC GCGGCGATCT GCATTCTCGT AAACGCCTCC
AAGGGCGTGT CCATGATCCA GCTTTCCCGC GATCTGGACT GCCAGTACAA GACCGCCTTC
GTCCTGGCCC ACAAGCTGCG CGAAGCCATG GCGCAAGAAG TTCAGACAGG CGAAGTTCTC
GAAGGTCACG TTGAGATTGA TGGGGCGTAC TTCGGCGGGC ACATTCGTCC GGAGAACCGG
AAAGAGGATC GCAAGGACCG TCGCCTGAAA GAGAACCAGA CCGGCAAGCG CCGCGTTGTC
GTCGCCCTGC GCGAGCGGGA AGGCCGCACC CTGCCGTTCG TGACCAAGCT GGAAAGCGAA
GGCGTTGCGC TGGCGAATGA GAACGTTTGC CGCATGGCGA CAGTTTCTGC TGACGAGGCA
AGCCACTGGG ACATGCTGCA CAACGGCTGG GACGTGCAGC GCGTGAACCA TTCGCAGGTC
TACAGCGACC ACGGCAAGCA CACCAATCTG GTAGAAAGCT TCTTCTCGCG CCTGCGCCGC
ATGGTGCAAG GCCAACACCA CCACGTCAGT CCGCAGTACC TCTACCAGTA CGCGAACCAC
GCGGCGTGGC TTGAAGACAA CCGCCGCAAG GACAACGGTG CGCTGGCATC TGCGCTGATT
ACGAACGCGA TGGATGCGCC GGTCAGCCGT CGGTGGAAAG GCTACTGGCA GCGCGCGGCG
TAA
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| Protein sequence | MAQHFLLSAA SRTLSLRSIY KAGEDAAYNV FCEMRWPETN GEAVCPRCSH GETYSISTRR
KFKCKNCHHQ FSVTSGTIFA SRKMDFVDLL AAICILVNAS KGVSMIQLSR DLDCQYKTAF
VLAHKLREAM AQEVQTGEVL EGHVEIDGAY FGGHIRPENR KEDRKDRRLK ENQTGKRRVV
VALREREGRT LPFVTKLESE GVALANENVC RMATVSADEA SHWDMLHNGW DVQRVNHSQV
YSDHGKHTNL VESFFSRLRR MVQGQHHHVS PQYLYQYANH AAWLEDNRRK DNGALASALI
TNAMDAPVSR RWKGYWQRAA
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