| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2472 |
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| Symbol | |
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| ID | 8420334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2833079 |
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| End bp | 2835463 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645039075 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | YP_003199332 |
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| Protein GI | 258406590 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000184576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000743586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAAAAAA ATCAATACAC CGCAGACAGC ATCACGATTC TCGAGGGCCT TTCCGCGGTC
CGCAAGCGCC CAGCCATGTA CATCGGATCC ACGGATCTGC AAGGGTTGCA CCACCTGGTC
TATGAAGTGG TCGACAACGC CATCGATGAG GCCATGGCCG GGTATTGCAA CCGGGTCAAG
GTGACCATTC ACCTCGACAA CAGCGTGACC ATCTCCGATG ACGGCCGCGG AATTCCTGTG
GATATGCACC CCAAACAAAA CAAGCCGGCG GTTGAGGTCG TTATGACCGT TCTGCACGCC
GGTGGGAAGT TTGATAACGA AACATACAAG GTTTCCGGTG GATTGCACGG CGTAGGTGTG
TCTGTGGTCA ATGCCTTGTC CGAATACCTC GAAGTGACTA TCCAGCGCTC GGGAACCAAA
TACCACCAGC GCTATGAACG CGGTCTGCCC AAAAGCGAAC TCGAAGAGCG CGGCCCGACC
CACCGTACCG GGACCACCAT CCGTTTTCGT CCTGACGAAG AAATATTCGC CGACCTCAAT
TTCACCGCCG CAACCTTGAC CAAGCGGTTC GAAGAATTGG CCTATCTCAA CAGTGGTCTG
GAAATCGCGT TTTTCGACGA ACGAACCCAG GAAAGCCAAC GTTTTAAATA CGACGGGGGA
ATCCGGTCCT TTATCGAAAA TCTCAACGCC GATGAAGGGG CTTTGCATTC GATCGTTTAC
GGGCACGGGG AGGTCGAGAA TGTGGCCATC GAATTCGCCC TGCAATACAA CGGCGGGTTC
AAAGAAAATG TCCATTCCTT TGCCAACAAT ATCCGGACCA AGGAGGGCGG CTCGCACCTC
TCAGGTTTTA AGACGGCGCT GACCCGGAAT ATCAATACCT ACCTTCTTCA CGCTGATCTT
CCCAAGAAAT TCAAGACCAA GATTACCGGC GACGATGTCC GTGAGGGGCT GACGGCCGTG
GTCTCCGTGA AACTCCCCAT GCCCCAGTTT GAGGGGCAGA CCAAGACCAA ACTCGGTAAC
AGCGAAGTCG CCGGCCATGT GGCCTCTGTA ATCTCCTCCC ATCTAGGCAC CTATCTGGAA
GAAAACCCCA AGGACGCCAA AGCAATCGTC GAAAAGATCG TTGATGCCGC CCGAGCCAGG
GATGCAGCGC GCAAGGCCAA AGACCTGGTC CGCCGCAAAT CCGCCTTGGG CGACAACGCC
CTGCCTGGAA AACTCGCCGA CTGTCAGAGC AAGGACCCCA AGGAGAGTGA ACTCTTTATC
GTTGAGGGCG ATTCGGCAGG TGGTTCGGCC AAGCAGGGAC GGGACCCGAA ATTCCAGGCC
ATTTTGCCTC TGCGGGGCAA GATTTTGAAT GTCGAAAAGA CCCGTTTTGA CAAAATGCTT
GAAAATAAAG AGATCAAGCA TCTTATCACC GCCATGGGGG CCGGAATCGG TGAAGAGGAA
ATCAACCTCG AGAAACTGCG GTATCACAAA GTCATCATTA TGACCGACGC CGATGTTGAC
GGGGCTCACA TCCGGACCCT GCTGTTGACC TTCTTTTTCC GGCAATACCC GCAATTGATC
GAGCATGGCT ATCTGTATAT CGCGCAACCT CCGTTGTACC GGGTGCATAA GGGAAATTTC
GAACGTTTTC TTTCCACGGA AAACGAACTC AAACAATACC TCATGCAACG CATCAGCGAT
GAATTAAAGG TCACGACACC TTCTGAGCAC GCCTTTGAAG GGCAAGCCCT AGTGCAATTG
CTGGATTCTA TTGTCGCTTT GCAAGATAAA ATGCGGGATG TGGCCAACTT CGGCGTTCAA
GAGGATCTGT TTTGGGATAT ACTCCAATAC GGACAGCGCT TGCGTCCAGA GACGTTGCGC
GATTCGGAAC TCTATACACC GTTTTTTGAA TATATGGAGC AGCTCGGCTA CGATCTTGAG
GTTGAGGAAG AAGAAGAGGA AGAAGAAAGC CGTTGGTATT TGAATATTAT CGATCGCAAT
GACCACCGGG TCCATCTCGG TATCGAGTTC TTCAACTCAA AGCTCTATAA AATTGCCTAC
CAAATTCTTG ATGAGCTCAA ATCGCACAGT CCCGAACTCA TTTTCACGGT CACCAGCAAG
AGTACAAGTC TGGATATCGA CTCCCCATTT GGCCTTCTGG AGCATGTCCT TGCGGAAGCG
GACAAGGGCA TAAATGTCCA GCGGTATAAA GGGTTAGGGG AAATGAACCC CAAACAATTG
TGGGAGACCA CGATGGAGCC CGATGACCGC ATGCTGCTTC AAGTCGATAT TGAAGATGCC
GCGGAAGCCG ACAGTATTTT CAGTAAATTG ATGGGAGATA AAGTCGAACC CCGCCGGGAT
TTCATCGAGC GCAATGCCTT GAGTGTCGAT GAATTGGATA TCTAG
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| Protein sequence | MEKNQYTADS ITILEGLSAV RKRPAMYIGS TDLQGLHHLV YEVVDNAIDE AMAGYCNRVK
VTIHLDNSVT ISDDGRGIPV DMHPKQNKPA VEVVMTVLHA GGKFDNETYK VSGGLHGVGV
SVVNALSEYL EVTIQRSGTK YHQRYERGLP KSELEERGPT HRTGTTIRFR PDEEIFADLN
FTAATLTKRF EELAYLNSGL EIAFFDERTQ ESQRFKYDGG IRSFIENLNA DEGALHSIVY
GHGEVENVAI EFALQYNGGF KENVHSFANN IRTKEGGSHL SGFKTALTRN INTYLLHADL
PKKFKTKITG DDVREGLTAV VSVKLPMPQF EGQTKTKLGN SEVAGHVASV ISSHLGTYLE
ENPKDAKAIV EKIVDAARAR DAARKAKDLV RRKSALGDNA LPGKLADCQS KDPKESELFI
VEGDSAGGSA KQGRDPKFQA ILPLRGKILN VEKTRFDKML ENKEIKHLIT AMGAGIGEEE
INLEKLRYHK VIIMTDADVD GAHIRTLLLT FFFRQYPQLI EHGYLYIAQP PLYRVHKGNF
ERFLSTENEL KQYLMQRISD ELKVTTPSEH AFEGQALVQL LDSIVALQDK MRDVANFGVQ
EDLFWDILQY GQRLRPETLR DSELYTPFFE YMEQLGYDLE VEEEEEEEES RWYLNIIDRN
DHRVHLGIEF FNSKLYKIAY QILDELKSHS PELIFTVTSK STSLDIDSPF GLLEHVLAEA
DKGINVQRYK GLGEMNPKQL WETTMEPDDR MLLQVDIEDA AEADSIFSKL MGDKVEPRRD
FIERNALSVD ELDI
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