Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2429 |
Symbol | |
ID | 8420289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2782787 |
End bp | 2784346 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645039030 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_003199289 |
Protein GI | 258406547 |
COG category | [C] Energy production and conversion |
COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.765246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000212597 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATCGAG AGGCCCTGAT TGAACAATTG GATGCGGTGG CCACCTGGGA TGTGCTCGTC ATCGGCGGCG GCGCCACCGG GTTGGGCGTC GGCCTCGACG CTGCGGCCCG GGGATATCAG GCCGTCGTTC TTGAACAAGG GGATTTCGCG CAGGCAACCT CGAGCCGGAG CACCAAACTC ATCCACGGCG GTGTGCGCTA TTTACAACAG GGCAATGTGG CCCTGGTCAT GGAGGCCCTG CATGAGCGGG GCAGGCTGCT GCATAACGCA CCACATCTGG TGTACAACCA GGCCTTTGTC GTCCCCGATT ACAAATGGTG GGAGCGTCCG TTTTACGGGG TCGGCCTCAA ACTCTACGAC ATGCTGGCTG GCAAGCTCGG GTTTGGCCGC TCCAGGATGC TCAGCCGCAG CCAGACCCTG GAGTATATTC CCCAATTGCG ACAGGACGGT CTGCGGGGCG GGGTCATCTA CCACGACGGG CAGTTCGATG ATACCCGGCT GGCTGTGACC TTGGCTCAGA CTATGGTCGA TCAGGGCGGG TGCGCTCTGA ACCATGTGCA GGTGACGGAG GTGTGCAAGG ATGCTGAAGG AGTGGTCCAG GGCGTTGTAT GCCAAGACCG CATCAGCGGC CGGGAGTACC GGCTCAACGC CAAGGTGGTG GTCAACGCCG CAGGGATTTT TGTCGACGAG ATCCGGCGTA TGGATGTGCC AGACTGTACC CCGTTGATTG CCCCGAGCCA GGGCGTCCAT CTTGTGCTCG ATAACCGGTT CGATCCCGGG GAGACAGCGA TCATGGTCCC CCATACAGAT GACGGCCGGA TCATTTTCAT GGTTCCTTGG CATGGCCGCG TGCTTGTCGG GACCACGGAA ACGTCGCTGG AGAGTGTGGC CCTCGAACCG CGCCCCTTGC CTGAAGAAAT CGAGTTTCTG CTCTCCCATG CCAGCCGCTA TCTGGACCAG CCGGTGCACC GGGAGGATAT CCTTTCGGTG TTTGCTGGCA TCCGTCCCCT TATCGCTGGC GAGGAAGCGG CCAAAACGTC TTCCCTGTCT CGAGGCCACC ATCTGACCGT TTCCCATTCC GGTCTGGTGA CCATCGGCGG CGGCAAGTGG ACGACCTACC GCAAAATGGC CGAGGACACT GTGGACACCG CGGCCCAGTT CGCCGGCCTG GAGGAAAGGC CGTGCCCTAC GCAGCACATG CGGTTGCACG GCTGGACCGC CGAAGCGGAT TCCAACGATT TTTTGTCCCT GTACGGCACG GACAGGGCGG CCATAGAATC GCTGATGCGC ACCGATCCGG ACCTGGCGGA TCGGATCCAT CCACGTCTGC CCTATCGCAA AGCCGAAGTG GTCTGGGGCA CCCGGCAGGA AAGCGCTCGT ACAGTGGCCG ATATCCTTGC CCACCGCACC CGCGCCCTGC TTCTGGACGC CAGGGCGAGC ATGGAAGCCG CTCCTGAAGT CGCCCGGCTC ATGGCCCGAG AGTTGAGCCG GGACGAAGAG TGGCAGGCTG CGGAAATCGC CCGGTACTGC GACAAGGCGG CCTTTTTTTA CCCCGAATAA
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Protein sequence | MDREALIEQL DAVATWDVLV IGGGATGLGV GLDAAARGYQ AVVLEQGDFA QATSSRSTKL IHGGVRYLQQ GNVALVMEAL HERGRLLHNA PHLVYNQAFV VPDYKWWERP FYGVGLKLYD MLAGKLGFGR SRMLSRSQTL EYIPQLRQDG LRGGVIYHDG QFDDTRLAVT LAQTMVDQGG CALNHVQVTE VCKDAEGVVQ GVVCQDRISG REYRLNAKVV VNAAGIFVDE IRRMDVPDCT PLIAPSQGVH LVLDNRFDPG ETAIMVPHTD DGRIIFMVPW HGRVLVGTTE TSLESVALEP RPLPEEIEFL LSHASRYLDQ PVHREDILSV FAGIRPLIAG EEAAKTSSLS RGHHLTVSHS GLVTIGGGKW TTYRKMAEDT VDTAAQFAGL EERPCPTQHM RLHGWTAEAD SNDFLSLYGT DRAAIESLMR TDPDLADRIH PRLPYRKAEV VWGTRQESAR TVADILAHRT RALLLDARAS MEAAPEVARL MARELSRDEE WQAAEIARYC DKAAFFYPE
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