| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2322 |
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| Symbol | |
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| ID | 8420182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2638728 |
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| End bp | 2639726 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 645038925 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_003199184 |
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| Protein GI | 258406442 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCTA GATTATTGAT TGCTCTTTTG TTTACGTGCT TCGTTTCAAT TCCAATGCAT
GTAGCAGCCC AAGATTACAA ACCGATGACA ATCCGTGCAG CTACTGCAAA CCCCGAAGGG
AGTTTGCACA CAACTGCCAT TGATAAATTT AAAGAAATTG TCGAAAAAAA GTCTGATGGC
AAGATAGAAG TAATTACTTT TTATGGCGGC TCAATGGGTG ACGAGCAAGC TAATGTGAAG
CAGTTGCGCT CCAATGAAAT ACAACTTGCT GTTTTGGCTG TCGGTAATTT GACGCCATTT
TCTAGTCAAG CCTCAATTTA TTACATGCCC TACATGTTTC CAAAAATTGA ATCAGCTTAT
AAGCTTTTCA ACCACGATGA GTTTAATAAT GAAATAGCTG ATCAGATTGC TCAAGAAAGT
GGAACAAGGC CTCTCTCTTG GTTGATTGGC GGCTATCGTC ATCTTACGAA TTCAAAGCAC
CCTGTCACCA ACATTGACGA TCTTCAAGGC TTAAAAATTC GCGTACCTCC TGTGGATGTT
CAAATTAAAA GTTTTAAATC ATGGGGTGTG AATCCTCATC CTGTGGCATG GGATGAAACC
TTTAACGCAC TTCAACAGGG TGTGGTTGAT GGGCAAGAAA ACCCCCATTC TGTTAATCGC
GACCAGAAAT TTTGGGAAGT ACAGGATTAT ATTACAGAAT TGCATTACCT CCTTTGGGTA
GGTCCAATGC TTTTCAGTGA AACTTGGTAT CAAAATTTGC CTGAAGCAAA TAAGCAGTTG
GTTACAAGTG CCGCAAAAGA GGCTGCTCAA TATGAATGGG ATTGGTCTGC CCAAGAAGAA
CAAAAAGCTT TGCAGCAATG CCTTGATCAC GGAATGGAGC TTCACAAACT TAATGACGAA
GAAGTTTGGG AGTCCAAGGC TCGTGCTCTT TGGTCAGAAT TCTATGATGA AGTTGGTGGC
AAAGAGACTG TTGATAAGGT TGTCGACATC ATCAAGTAA
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| Protein sequence | MKARLLIALL FTCFVSIPMH VAAQDYKPMT IRAATANPEG SLHTTAIDKF KEIVEKKSDG
KIEVITFYGG SMGDEQANVK QLRSNEIQLA VLAVGNLTPF SSQASIYYMP YMFPKIESAY
KLFNHDEFNN EIADQIAQES GTRPLSWLIG GYRHLTNSKH PVTNIDDLQG LKIRVPPVDV
QIKSFKSWGV NPHPVAWDET FNALQQGVVD GQENPHSVNR DQKFWEVQDY ITELHYLLWV
GPMLFSETWY QNLPEANKQL VTSAAKEAAQ YEWDWSAQEE QKALQQCLDH GMELHKLNDE
EVWESKARAL WSEFYDEVGG KETVDKVVDI IK
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