| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2271 |
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| Symbol | |
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| ID | 8420129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2582049 |
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| End bp | 2582894 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645038872 |
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| Product | Substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_003199133 |
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| Protein GI | 258406391 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAAAGC TGACGCTTAT CGCTTTGGTA CTGAGTGCTT TCATTCTGGC TGGAGTAAGC
ACTGCCATGG CCAAGGACAC CGTGGAACTG GCCTATGTGG AATGGTCGTC CGAGGTCGCT
TCGACCAATG TGGTCCAAGC TGTTTTGCAG GAAAAAATGG GTTATGAATG TGAAATCACG
CCGGTAAGTG GTGCCGCCAT GTGGCAGGCG ACTGCCACAG GTGACGTGGA CGGACTGGTA
GCCGCCTGGC TGCCCACCAC CCACGGCCAT TACCTGGAAA AGGTCAAGGA CGAGGTTGTC
GATCTCGGTC CCAACCTCGA AGGCACCCGT ATCGGTCTTG TTGTGCCTGA GTATGTGAGC
ATCGATTCTA TCGATCAAAT CAACGAGTAT GCCGAGAAGT TCGACGAGCA GATCATCGGG
ATCGATCCCG GTGCGGGCAT CATGTCGGCT ACTGAAGAGG CGGTCGAAGA ATACAACATG
GACAACATCG AACTCATGGA AGGCAGCGGC GCGACCATGA CCGCGGTTTT GAAAAACCGT
ATCGAAGACA AAGAATGGGT CGTGGTCACC GGCTGGACGC CGCACTGGAA GTTCGCCAAG
TGGGATCTCA AGTACTTGAA CGACCCCAAG GGCGTCTATG GCGGCGAAGA GTTCATTTCG
ACCATCGTCC GCCAGGGGCT GAAAGAAGAT ATGCCTGAAG TCTACGAATT TCTGGACAAC
TTCTACTGGG CTCCCGAAGA CATGGCCGAA GTCATGGTCT GGAACCAGGA CGGCATGGAT
CCCTACGAAT CCGCCAAGAA GTGGATCAGT GAGAATCCTG AAAAAGTCGA GAAGTGGCTG
CCCTAG
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| Protein sequence | MRKLTLIALV LSAFILAGVS TAMAKDTVEL AYVEWSSEVA STNVVQAVLQ EKMGYECEIT
PVSGAAMWQA TATGDVDGLV AAWLPTTHGH YLEKVKDEVV DLGPNLEGTR IGLVVPEYVS
IDSIDQINEY AEKFDEQIIG IDPGAGIMSA TEEAVEEYNM DNIELMEGSG ATMTAVLKNR
IEDKEWVVVT GWTPHWKFAK WDLKYLNDPK GVYGGEEFIS TIVRQGLKED MPEVYEFLDN
FYWAPEDMAE VMVWNQDGMD PYESAKKWIS ENPEKVEKWL P
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