Gene Dret_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2250 
Symbol 
ID8420108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2555334 
End bp2556869 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content64% 
IMG OID645038851 
ProductMg chelatase, subunit ChlI 
Protein accessionYP_003199112 
Protein GI258406370 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID[TIGR00368] Mg chelatase-related protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.802745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCA AGGTGACCAC TGCGGCCTTG TTGGGCATAG ACGCCTTTCC TGTGGACCTG 
GAAGCCGACC TGACCCGGTC TGGCATCCCG GCCTTCACCA TGGTCGGCCT GGCAGAAGGC
GCTGTCCGGG AAAGCAAGGA GCGGGTCCTG ACCGCGCTGA AGAATACCGG CTTCCGTCTG
CCCCCGGCCC GGATTACCAT CAACCTCGCT CCCGCAGACA TGCGCAAGGA GGGCAGCGCC
TACGACCTGG CCCTGGCACT CGGCCTGCTC GGTGCGAGCG GAGAACTGCC TGAACAGGCT
TTAAACGGGT ATCTTTTTGC CGGTGAACTC TCGCTCAACG GCCGGCTCAA ACCCATCAAT
GGCGCGCTGC CCATGGGCCT CAAGGCCCGG GAACGCCAGG CCCGGGGATT GCTCCTCCCC
GCGGACAACG CTCCCGAAGC CGCCGTCGTC GACGACCTGC CCGTCTATCC GGTCCAGACC
CTGGGGCAAG CTATCCGCTT CATTCTAGGA GAAGAGGACC TCCATCCCCA GGGCAGCGAC
ATCCAAGGAC TGTGGGGCCA GCGCGAAGAC TTTCTGGTCG ACTTCAGTGA AGTCAAAGGC
CAGGAACACG CCAAGCGGGC CATTGAAATC GCTGCCGCCG GCAACCACAA TCTGCTTTTC
CTCGGCCCGC CAGGTAGCGG CAAGACCATG CTCGCCCAGC GCCTCCCCAC CGTGCTGCCA
CCGCTGGAAT TCAATGAGGC CCTGGAGGTG ACCAAAATCT ATTCCGTGGC CGGTCAGCTC
GACCCCGGCC AAGCTTTGGT GATCACCCGA CCCTTTCGCT CCCCGCACCA CACCATTTCC
GACGCCGGGC TTATCGGCGG CGGCCACTAT CCTCGGCCCG GAGAAGTGTC GCTGGCCCAC
CACGGCGTCC TTTTTCTCGA CGAACTGCCG GAATTCAAAA AGCACGTCCT CGAAGTCCTG
CGCCAGCCAT TGGAAGATGG GCGGGTGACC ATTTCTCGGG CCGCTGTGTC TCTGAGCTAC
CCTGCCGATT TCATGCTCGT GGCGGCCATG AACCCCTGCC CTTGCGGCTA TCTGACCGAC
GAGCAACACC CCTGCACCTG CACAGCGCAA CAGATCCAGC GCTACCGTTC CCGGCTCTCC
GGACCGTTGC TCGACCGCAT CGACCTCCAG GTCGAGGTCC CGGCAGTGCC TTACAGCGAC
CTCAAAAAAA CCCAAAGCAG CAAGGATTCG GCCTCCATGC AGGCCAATAT CCTCCAGGCG
CGGCAGATCC AGGCCCAACG CCTTGCCGGC ACGCCCATCA CAGCCAACAG CCAGTTGCGC
GGAACGTGGC TCCAGGCCCA CTGCGCCCTG ACCGAGACCG AGCACCAGTT CCTGGAGCAG
GCTGTCCACA AGCTCGGGCT CTCCGCCCGG GCCTATACGC GGGTTTTACG CATCGCCCGG
ACCATTGCCG ACCTCGAGTC CGCAGACCGG ATCCAGATCC CGCACTTGGC TGAGGCGATC
AATTTCCGGG TCCTGGACCG CGAGGACCAG TGGTGA
 
Protein sequence
MIAKVTTAAL LGIDAFPVDL EADLTRSGIP AFTMVGLAEG AVRESKERVL TALKNTGFRL 
PPARITINLA PADMRKEGSA YDLALALGLL GASGELPEQA LNGYLFAGEL SLNGRLKPIN
GALPMGLKAR ERQARGLLLP ADNAPEAAVV DDLPVYPVQT LGQAIRFILG EEDLHPQGSD
IQGLWGQRED FLVDFSEVKG QEHAKRAIEI AAAGNHNLLF LGPPGSGKTM LAQRLPTVLP
PLEFNEALEV TKIYSVAGQL DPGQALVITR PFRSPHHTIS DAGLIGGGHY PRPGEVSLAH
HGVLFLDELP EFKKHVLEVL RQPLEDGRVT ISRAAVSLSY PADFMLVAAM NPCPCGYLTD
EQHPCTCTAQ QIQRYRSRLS GPLLDRIDLQ VEVPAVPYSD LKKTQSSKDS ASMQANILQA
RQIQAQRLAG TPITANSQLR GTWLQAHCAL TETEHQFLEQ AVHKLGLSAR AYTRVLRIAR
TIADLESADR IQIPHLAEAI NFRVLDREDQ W