Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2228 |
Symbol | |
ID | 8420085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2530418 |
End bp | 2530876 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645038828 |
Product | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ |
Protein accession | YP_003199090 |
Protein GI | 258406348 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
TIGRFAM ID | [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0339281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAA GCGTTTCGGT TGTGGAATGC CGGGATATCC TGGCCATGCT CCCCCACCGG TATCCGTTTT TACTTGTCGA CCGGGTGCTG CAGTACGCTC CGTATGAGTC GCTGCAGGCC ATAAAAAATG TGACCTTTAA TGAGCCGTAT TTTCAGGGCC ATTTTCCCGA TTATCCCGTC ATGCCGGGGG TGCTCATTCT GGAAGCTCTG GCGCAGGCCG GGGGCATACT GGTGGTCAAA TCCATGCCGG AAATCATTGG TTCCAAAATC TTCCTCTTCA CCGGCATTGA AAAGGTCCGC TTCCGTCAAC CGGTCTTCCC CGGTGATCAA TTGCATCTCT CCGTCGAATA TGTGCGTCAT AAGCTCAATA TGTGGAAGAT GCGGGCCACG GCTCAGGTCG AGCAGCGGCT CGTCGCCCAA GGGGAATTCA ACGCGAGTAT TGTGGACCGG GAGGATTAA
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Protein sequence | MSESVSVVEC RDILAMLPHR YPFLLVDRVL QYAPYESLQA IKNVTFNEPY FQGHFPDYPV MPGVLILEAL AQAGGILVVK SMPEIIGSKI FLFTGIEKVR FRQPVFPGDQ LHLSVEYVRH KLNMWKMRAT AQVEQRLVAQ GEFNASIVDR ED
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