Gene Dret_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2228 
Symbol 
ID8420085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2530418 
End bp2530876 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content54% 
IMG OID645038828 
Productbeta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 
Protein accessionYP_003199090 
Protein GI258406348 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0339281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAA GCGTTTCGGT TGTGGAATGC CGGGATATCC TGGCCATGCT CCCCCACCGG 
TATCCGTTTT TACTTGTCGA CCGGGTGCTG CAGTACGCTC CGTATGAGTC GCTGCAGGCC
ATAAAAAATG TGACCTTTAA TGAGCCGTAT TTTCAGGGCC ATTTTCCCGA TTATCCCGTC
ATGCCGGGGG TGCTCATTCT GGAAGCTCTG GCGCAGGCCG GGGGCATACT GGTGGTCAAA
TCCATGCCGG AAATCATTGG TTCCAAAATC TTCCTCTTCA CCGGCATTGA AAAGGTCCGC
TTCCGTCAAC CGGTCTTCCC CGGTGATCAA TTGCATCTCT CCGTCGAATA TGTGCGTCAT
AAGCTCAATA TGTGGAAGAT GCGGGCCACG GCTCAGGTCG AGCAGCGGCT CGTCGCCCAA
GGGGAATTCA ACGCGAGTAT TGTGGACCGG GAGGATTAA
 
Protein sequence
MSESVSVVEC RDILAMLPHR YPFLLVDRVL QYAPYESLQA IKNVTFNEPY FQGHFPDYPV 
MPGVLILEAL AQAGGILVVK SMPEIIGSKI FLFTGIEKVR FRQPVFPGDQ LHLSVEYVRH
KLNMWKMRAT AQVEQRLVAQ GEFNASIVDR ED