| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2225 |
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| Symbol | |
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| ID | 8420082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2526944 |
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| End bp | 2528542 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645038825 |
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| Product | ABC transporter related |
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| Protein accession | YP_003199087 |
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| Protein GI | 258406345 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.691472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGTG TGCGGCGTAT TGTCGAGATC AAAAACCTGT GCGTCTGGTT CCCGGGGGAC
CAGGAGCCGG CTGTCAACGG TGTGAGCTTG TCCTTGGAGG CCGGACAAAC CCTGGGGCTG
GTAGGCGAAA GCGGCTCCGG AAAATCCGTC ACCGCCCTGG CCCTGATGGG CCTGCTGCCC
CCGGCAGCCC GCTGCACGGC TGAAAGACTC GAGTTGAACG CTACCGATAT CCTGCGCGCC
AATGCCAAAA CTGTGCGGGC TCTGCGCGGC AACTCCGCGG CCATGGTCTT TCAAGAGCCC
TTGTCCGCTC TGAACCCGCT GCACACCATT GAACGGCAAA TCACCGAACC GCTGCAATGG
CATACGGGTC TTTCCGGAGC GAACGCCCGC AAGAAGGCGA TTGAGCTCCT GGAGATGGTC
GAAATCAAGG AACCGGCGGC CAAACTCACG ACCTATCCCC ATCAACTCTC AGGGGGGCAG
CGCCAGCGGG TCATGATCGC CATGGCCCTT TCCACATCCC CGCGGGTCCT TATTGCCGAC
GAACCAACGA CCGCCCTGGA TGTCACCGTC CAGCGCCAGA TTTTGGACCT GCTGCAGCGG
TTGCAGCACA ATTTCGATAT GGCCTTGATG CTCATTTCCC ATGACCTGGC CATGATCAAG
GACGTTACCG CTGACACCGC GGTCATGAAG CAGGGCCGCC TGGTCGAAAA TCGGCCCACG
GCTGAACTCT GGGCCGAGCC GCACCACCCG TACACCTCGG CTTTGATCAA TGCCGAGCCA
CACGGGGCGC CGGTTCCCGC CCGTGCTACA GCCCCCGTAC TTCTGGATGC CGCAGGACTC
CGGGCCTGGT TCCCGATCAA AAAAGGAGTA TTCAAACGGA CGGTGGGGCA CGTCAAAGCC
GTGGACGGGG TCGATCTCCG GGTGCGGCAG GGGCATGCTG TGGGGATTGT CGGGGAAAGC
GGCTCGGGAA AAACGACGCT TGGCATGGCC CTGCTGCGTT TGGCCCACAG TCGCGGCCAG
ATTCTGTTCG ACGGGCAGCG GATCGATTCG CTGCGCTCCT CCCAACTCCG CTTTTTGCGC
CGCCGACTGC AAATCATCTT TCAAGATCCC TTCGGCAGCC TCAATCCACG GCTGGACACC
ACGGCCATCA TTGCTGAAGG GCTTAAGGTC CATGAATCCC TCGGGGAATC GGACCGGATC
CAGCGCGTGG TCCAAACCAT GGAGTTGGTC GGCCTCGACC CCGCCTGGCG CCACCGCTAT
CCGCATGAAT TTTCCGGTGG CCAACGTCAA CGCCTCGCCA TCGCCAGGGC GCTCATCCTC
CGCCCCAGCC TTGTGGTCCT GGACGAGCCG ACCTCTTCTC TGGACCGCTC CATCCAGTCC
CAGATCCTGG TCTTGCTGCG GCGCCTCCAA AAAGAACTCG GTTTGAGCTA TCTGTTTATC
TCCCACGATC TCAAGCTGGT CCGCGCCCTG TGCCACGAAG TTCTGGTCAT GCACGGCGGC
AGTTGTGTGG AGCACGGGGC CACGGAGGCC GTGCTGTCCG AGCCCCAAGC CCCAAGCACA
CGGCGGCTGG TCAGCGCTGC CTTCGGCGAA GCCGGCTGA
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| Protein sequence | MTGVRRIVEI KNLCVWFPGD QEPAVNGVSL SLEAGQTLGL VGESGSGKSV TALALMGLLP
PAARCTAERL ELNATDILRA NAKTVRALRG NSAAMVFQEP LSALNPLHTI ERQITEPLQW
HTGLSGANAR KKAIELLEMV EIKEPAAKLT TYPHQLSGGQ RQRVMIAMAL STSPRVLIAD
EPTTALDVTV QRQILDLLQR LQHNFDMALM LISHDLAMIK DVTADTAVMK QGRLVENRPT
AELWAEPHHP YTSALINAEP HGAPVPARAT APVLLDAAGL RAWFPIKKGV FKRTVGHVKA
VDGVDLRVRQ GHAVGIVGES GSGKTTLGMA LLRLAHSRGQ ILFDGQRIDS LRSSQLRFLR
RRLQIIFQDP FGSLNPRLDT TAIIAEGLKV HESLGESDRI QRVVQTMELV GLDPAWRHRY
PHEFSGGQRQ RLAIARALIL RPSLVVLDEP TSSLDRSIQS QILVLLRRLQ KELGLSYLFI
SHDLKLVRAL CHEVLVMHGG SCVEHGATEA VLSEPQAPST RRLVSAAFGE AG
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