Gene Dret_2182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2182 
Symbol 
ID8420038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2485521 
End bp2485832 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content49% 
IMG OID645038781 
Productribosomal protein L21 
Protein accessionYP_003199044 
Protein GI258406302 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0261] Ribosomal protein L21 
TIGRFAM ID[TIGR00061] ribosomal protein L21 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.035762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.921653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCGA TAGTAGCTAC TGGCGGAAAA CAATACCGGG TCAAGGAAGG CATGGAGATC 
GATGTTGAAA AACTCCGCGC CGAACCCGGT GATGAAATTG CTTTGGACAA CGTCTTGCTC
TTGGGTCAAG ACGATGATGT GAAAATTGGA ACCCCTTACT TGGAAAACGC CAAAGTGACC
TGTGAAGTCG TCAAGCACGA CCGTGGTGAC AAGGTGATTA TCTTCAAGCA TAAGCGCCGC
AAGGATTACC GGCGTAAGAC AGGGCACCGC CAAGATTACA CCCGATTGAA AGTGACTGCC
ATACAGTCGT AA
 
Protein sequence
MYAIVATGGK QYRVKEGMEI DVEKLRAEPG DEIALDNVLL LGQDDDVKIG TPYLENAKVT 
CEVVKHDRGD KVIIFKHKRR KDYRRKTGHR QDYTRLKVTA IQS