Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2153 |
Symbol | |
ID | 8420004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2449379 |
End bp | 2450200 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645038747 |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_003199015 |
Protein GI | 258406273 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0684055 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGA TGGTACTTTT GTTGGTGGCC ATGACCGTCA CCTGCACGTT GGCTCTGGGA ACGGCTTGGG CCGACAAACT GGAAGAAATC AAAGAACGCG GCTACATGGT TGCCGGCGTC AAAGACGCTG TGGTCCCCTT CGGCTATGTG GACAAGGATA CCAACAATAT CGTTGGCTTT GATGTCGACA TCTGCAAAGA ACTCGCTGAC AAACTCGGTG TGGACCTGCG ACTCAAGCCC GTGACCTCCA GCACCCGGAT CCCCATGTTG GCCCAGGGCT CGGTCGACAT CCTGGCTGCA ACCATGACCC ACAAATTCAG CCGGGAAGAT TCCATCGACT TCTCCACGAC CTATTTCATG ACCGGCCAGA AACTCCTGGT CAAAAAAGAC TCCGACATTT CCTCCACTGC AGACCTGGCC GGCAAGAAAG TCGGGACCGC CAAGGGATCG ACTTCGGAAA AGAACATCAA AGAGGCTCAG CCCGAGAGCC GCGTCCTGTC CTTTGAGGGC TATCCGCAGG CATTTCTCGC TCTGCGTCAG GGCAAGGTCA AAGCCGTGAC CACGGATGCG ACCATTCTGC TTGGATTGAA AAACTCCGCA CCGGACCCGG ACAAGTACGC CATCGTCGGT GAGTACATCT CCGATGAACC CTATGGTCTC GGCGTGCCTG AAAACGAATC CAACTTCCGG GACTTCGTGA ACCGTTCCCT GGCTAAAATG TGGGTCAACG GAGAATACCA GGAAATCTAT AGCAAATGGT TCGGTAAAGA CACCAACTAC CACCTGCCCC TGGATTGGGA TATGCAGCCC TGGCCGTTCT AG
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Protein sequence | MRKMVLLLVA MTVTCTLALG TAWADKLEEI KERGYMVAGV KDAVVPFGYV DKDTNNIVGF DVDICKELAD KLGVDLRLKP VTSSTRIPML AQGSVDILAA TMTHKFSRED SIDFSTTYFM TGQKLLVKKD SDISSTADLA GKKVGTAKGS TSEKNIKEAQ PESRVLSFEG YPQAFLALRQ GKVKAVTTDA TILLGLKNSA PDPDKYAIVG EYISDEPYGL GVPENESNFR DFVNRSLAKM WVNGEYQEIY SKWFGKDTNY HLPLDWDMQP WPF
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