Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2152 |
Symbol | |
ID | 8420003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2448609 |
End bp | 2449337 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645038746 |
Product | ABC transporter related |
Protein accession | YP_003199014 |
Protein GI | 258406272 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.104649 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCTGA TTGAATTCAA AGACGTACAC AAATGGTTTG GCGATTTCCA TGTCATCAAG GGAGTCAATG AAACGGTTGA ACGCGGTGAG GTGCTGGTCA TTTGCGGCCC CAGCGGCTCC GGCAAATCGA CGCTGATCCG CTGTGTCAAC CGCCTTGAGG ATATTGGCAA GGGCGAGATC ATCTTTGAAG GGCGCGATAT TGCCCGGCGC GACGTGGATC TGAACAAACT CCGCTCCGAA ATCGGCATCG TTTTCCAGCA ATTCAACCTC TATCCCCACC TCTCCGTGCT GAAAAACGTC ACCCTGGCGC CGATCAAAGT CAAAAAACAG CCCGCCCAGG AGGCCGAGAA ACTCGGTCTG GAATTATTGG ATCGCGTCGG CATCCGCAAT CAGGCCCATA AATATCCCGT CGAACTCTCC GGCGGACAGC AGCAACGGGT GGCCATCGCC CGGGCCCTGG CCATGCGCCC GACGGTCATG CTTTTTGACG AGCCCACATC CGCGCTCGAT CCGGAAATGA TTAATGAAGT GCTCAATGTC ATGAAAGACC TCGCCCGCGA GGGAATGACC ATGCTCTGCG TGACGCACGA AATGGGCTTC GCCCGCGAGG TCGCCGACAG GGTCATTTTC ATGGACGAAG GCAGTGTCGT TGAAGAGGGC ACGCCGGAAC ACTTCTTTAC CAATCCTCAG CACGAGCGGA CCAAGGCATT CTTACGGGAA ATCCTGTAA
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Protein sequence | MALIEFKDVH KWFGDFHVIK GVNETVERGE VLVICGPSGS GKSTLIRCVN RLEDIGKGEI IFEGRDIARR DVDLNKLRSE IGIVFQQFNL YPHLSVLKNV TLAPIKVKKQ PAQEAEKLGL ELLDRVGIRN QAHKYPVELS GGQQQRVAIA RALAMRPTVM LFDEPTSALD PEMINEVLNV MKDLAREGMT MLCVTHEMGF AREVADRVIF MDEGSVVEEG TPEHFFTNPQ HERTKAFLRE IL
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