Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2134 |
Symbol | |
ID | 8419984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2431800 |
End bp | 2432507 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645038727 |
Product | protein of unknown function UPF0005 |
Protein accession | YP_003198996 |
Protein GI | 258406254 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000183428 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.170874 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGATT TTCGTAATAT CACCGCAACC CAGTCCAGCG CGGTGGCTAT CAACGCCTTC ATGCGCGGAG TCTACACCTG GATGTCTGGC GGCCTGCTGC TCACGGCCGT GGTCGCTTTC GGGGTCATCA ACACCCCGGC GCTCATCCAG ACCGTGGCCA GCAATCCGAC CATCCTGCTG GTGCTCATCC TGGCCGAACT CGGCCTGGTC CTGACCATCA GCGCCGGCAT CTCCAAACTC TCCGGGACCA TGGCCACGAG CCTGTTCATG CTCTACAGCG GCCTCAACGG CGTCACCCTG GCCCCTATCC TGCTGCTGTA CACCGGCGCC TCAGTGGCCG GGACCTTTGT CATCTGCGCC GGCATGTTCG GAGCCATGTC CCTCTACGGC TTGACCACGA AAAAGGACCT GACCTCCTGG GGCAGCTTCC TGTTCATGGG CCTGATCGGG ATCGTCCTCG CCGCGGTGGT GAACATGTTC CTGCAAAGCG CCATGATCGA ATTCGTGATC AGCGGTGTCG GCGTTCTGGT CTTCACCGGC CTGACCGCCT GGGACACCCA GCAGCTCAAG ACCATGGGTG AAACCGCCCC GGCCGACGAC GCCACCGCTG TGCGCCGCGG CACCATTCTC GGCGCCCTGC GGCTCTATCT CGACTTCATC AATCTCTTTC TCATGCTCCT GCGCTTCTTC GGCCAGATGC GCGAGTAA
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Protein sequence | MADFRNITAT QSSAVAINAF MRGVYTWMSG GLLLTAVVAF GVINTPALIQ TVASNPTILL VLILAELGLV LTISAGISKL SGTMATSLFM LYSGLNGVTL APILLLYTGA SVAGTFVICA GMFGAMSLYG LTTKKDLTSW GSFLFMGLIG IVLAAVVNMF LQSAMIEFVI SGVGVLVFTG LTAWDTQQLK TMGETAPADD ATAVRRGTIL GALRLYLDFI NLFLMLLRFF GQMRE
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