Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2077 |
Symbol | |
ID | 8419922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2368294 |
End bp | 2368833 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 645038665 |
Product | NusG antitermination factor |
Protein accession | YP_003198939 |
Protein GI | 258406197 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAG AAAGCGCCCG TTGGTATATC GTCCATGCCT TCTCAGGTTA TGAGCAACGC GTGGAGAAAA CCATTGCTGA AATGATCCGA AGTGGACAGG GCGAAGGGCT CATAGAGGAA GTGATCGTCC CTACTGAAAA AGTAGTGGAG ATGGTCAAAG GTCAGAAGAA AACGTCGACC CGCAAGTTTT ATCCCGGCTA TGTCCTGGTC AAGATGATCC TCAACGACAA GACCTGGCAC CTGATCCAGT CGATCCCGAA AGTGACAGGG TTTGTCGGAG GACAGAAGCG GCCGAAGCCC TTGACGCAAA AGGAAGCGGA CCAAATTCTG CAGACCATCG AGAGCCGCAA AGAGCAGCCG CGCCCGAAAT TCCATTTCGA ACGTGGCGAT GAAGTTCGCG TGATTGATGG GCCTTTTTCC GGCTTTAATG GGGAAGTAGA AGAGGTCAAT TACGATAAGG GCAAGCTCAG GGTTTCGGTT TCCATTTTCG GGCGGCAGAC ACCTGTTGAA CTCGATTTTG TCCAGGTCTC CAAAGGGTAG
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Protein sequence | MTEESARWYI VHAFSGYEQR VEKTIAEMIR SGQGEGLIEE VIVPTEKVVE MVKGQKKTST RKFYPGYVLV KMILNDKTWH LIQSIPKVTG FVGGQKRPKP LTQKEADQIL QTIESRKEQP RPKFHFERGD EVRVIDGPFS GFNGEVEEVN YDKGKLRVSV SIFGRQTPVE LDFVQVSKG
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