Gene Dret_2069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2069 
Symbol 
ID8419914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2356507 
End bp2356977 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content58% 
IMG OID645038657 
Productribosomal protein S7 
Protein accessionYP_003198931 
Protein GI258406189 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000023208 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.630428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGTA AAGGTCCAGT ACCAAAGCGG ACAGTGACGC CTGATCCGCG CTTTCAGAGT 
CGGTTGGTGG CCAAGTTCGT CAATCGCCTC ATGCGTGACG GCAAAAAGAG TCTTGGTGAG
CGGTTGCTCT ATCAGGCAAT TGACGACTTG GGCGAGCGGA CGAGCGAAGA GCCGCTCAAG
GCGTTCGAGC AGGCCTTGGA AAACGTCAAG CCGCAGCTCG AAGTCAAACC GCGCCGTGTC
GGCGGGGCGA CCTATCAGGT ACCTATGGAG GTCCGTCCCG AACGGCAGCA GACGTTGGCT
ATCCGCTGGT TGGTTACTGC GGCTCGTTCT CGGGGTGAAA AGGGGATGTC CAATCGTCTC
ACGGCCGAGT TGATGGATGC CTATAATGGG CGCGGCGGTG CCGTGAAGAA ACGCGAAGAC
ACGCACCGCA TGGCTGAAGC GAATAAAGCT TTCGCACACT ATCGTTGGTA G
 
Protein sequence
MPRKGPVPKR TVTPDPRFQS RLVAKFVNRL MRDGKKSLGE RLLYQAIDDL GERTSEEPLK 
AFEQALENVK PQLEVKPRRV GGATYQVPME VRPERQQTLA IRWLVTAARS RGEKGMSNRL
TAELMDAYNG RGGAVKKRED THRMAEANKA FAHYRW