Gene Dret_2064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2064 
SymbolrplD 
ID8419909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2351622 
End bp2352242 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content55% 
IMG OID645038652 
Product50S ribosomal protein L4 
Protein accessionYP_003198926 
Protein GI258406184 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000384651 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.231159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTGG TACAGATAGT AGATAAATCG AATCAAGCGG TGGGTGAAGT GACCCTGTCC 
AGCGAGGTGT TCGAACGGGA GGTCCGTGCT GAGATCCTCC ATCAGGTTGT TCGCTCCCAG
CTGGCCGCCA AACGTCGCGG GACTGTTGGG GTCAAAACCC GGTCCCTCAT CCGTGGCGGC
GGGCGGAAGC CGTGGCGCCA AAAAGGTACT GGACGCGCCC GGGCGGGCAC AGTTCGGTCG
CCAATCTGGA CGGGCGGAGC TATTGTTCAC GGCCCGCAAG CCCGGGATTA CGACATCAAG
GTCAATAAGA AGGTCAAGCG GTTGGCCTTG AAGATGGCCA TGTCCTCCCG GTTGGCAGAA
GACAACCTGG TCGTCGTGGA CAGTGTAACC CCTGAAGAGG TGAAGACGAA AAGCTTTCGG
AAAATCCAGG AACAATTGGA TTTGAAAAAA TGCTTGATTG TCACTGCGGA AAAAGATAAT
ACTCTTGAGC TTTCCGCCCG TAATATCCCT GGGGTCACCG TTATGACCTG GGACAACCTC
AATACCTTCG ATGTGTTGAA CCACGACCAG CTGGTCCTGG AGGCCAAAGC GGTGGAAAAA
ATCGAAGAAA AACTGGGGTA G
 
Protein sequence
MPVVQIVDKS NQAVGEVTLS SEVFEREVRA EILHQVVRSQ LAAKRRGTVG VKTRSLIRGG 
GRKPWRQKGT GRARAGTVRS PIWTGGAIVH GPQARDYDIK VNKKVKRLAL KMAMSSRLAE
DNLVVVDSVT PEEVKTKSFR KIQEQLDLKK CLIVTAEKDN TLELSARNIP GVTVMTWDNL
NTFDVLNHDQ LVLEAKAVEK IEEKLG