Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2064 |
Symbol | rplD |
ID | 8419909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2351622 |
End bp | 2352242 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645038652 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_003198926 |
Protein GI | 258406184 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000384651 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.231159 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGTGG TACAGATAGT AGATAAATCG AATCAAGCGG TGGGTGAAGT GACCCTGTCC AGCGAGGTGT TCGAACGGGA GGTCCGTGCT GAGATCCTCC ATCAGGTTGT TCGCTCCCAG CTGGCCGCCA AACGTCGCGG GACTGTTGGG GTCAAAACCC GGTCCCTCAT CCGTGGCGGC GGGCGGAAGC CGTGGCGCCA AAAAGGTACT GGACGCGCCC GGGCGGGCAC AGTTCGGTCG CCAATCTGGA CGGGCGGAGC TATTGTTCAC GGCCCGCAAG CCCGGGATTA CGACATCAAG GTCAATAAGA AGGTCAAGCG GTTGGCCTTG AAGATGGCCA TGTCCTCCCG GTTGGCAGAA GACAACCTGG TCGTCGTGGA CAGTGTAACC CCTGAAGAGG TGAAGACGAA AAGCTTTCGG AAAATCCAGG AACAATTGGA TTTGAAAAAA TGCTTGATTG TCACTGCGGA AAAAGATAAT ACTCTTGAGC TTTCCGCCCG TAATATCCCT GGGGTCACCG TTATGACCTG GGACAACCTC AATACCTTCG ATGTGTTGAA CCACGACCAG CTGGTCCTGG AGGCCAAAGC GGTGGAAAAA ATCGAAGAAA AACTGGGGTA G
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Protein sequence | MPVVQIVDKS NQAVGEVTLS SEVFEREVRA EILHQVVRSQ LAAKRRGTVG VKTRSLIRGG GRKPWRQKGT GRARAGTVRS PIWTGGAIVH GPQARDYDIK VNKKVKRLAL KMAMSSRLAE DNLVVVDSVT PEEVKTKSFR KIQEQLDLKK CLIVTAEKDN TLELSARNIP GVTVMTWDNL NTFDVLNHDQ LVLEAKAVEK IEEKLG
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