| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2048 |
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| Symbol | rpsE |
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| ID | 8419893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2345069 |
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| End bp | 2345560 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645038636 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_003198910 |
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| Protein GI | 258406168 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00145313 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0102029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACAGA ATGATCTTGG GCTGATAGAA AAAGTCGTGT ATTTAAACCG TGTGGCGAAG
GTGGTCAAAG GTGGCCGCAA TTTCAGTTTC GCTGCTCTTG TTGTTGTCGG TGACGGCAAC
GGGAAGGTCG GGTTCGGCCA CGGGAAAGCC AATCAGGTCC CTGATGCTAT CCGGAAGGCC
ACTGATCGGG CCAAAAAGGA TATGTTTGAC GTCGCATTGC TGGAAGGGAC TTTGCCGTAC
GAAGTTATCG GACATTATGG AGCCGGGCGA GTCATGCTCA AGCCCGCTTC CGAAGGGACC
GGCATTATCG CCGGCGGTCC GGTTCGTGCC GTCATGGAAG CAGTTGGCGT CCGTGACATC
CTGACCAAGG CAATTGGTAC GAACAACCCG TATAATGTTT TGAAAGCCAC TATTGCCGGA
TTGCAATCTT TGCGTAGTGC CGAAGAAGTC GGTCGCTTGC GCGGAAAGCA GTTGCAAATC
AGCCGCAAAT AG
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| Protein sequence | MEQNDLGLIE KVVYLNRVAK VVKGGRNFSF AALVVVGDGN GKVGFGHGKA NQVPDAIRKA
TDRAKKDMFD VALLEGTLPY EVIGHYGAGR VMLKPASEGT GIIAGGPVRA VMEAVGVRDI
LTKAIGTNNP YNVLKATIAG LQSLRSAEEV GRLRGKQLQI SRK
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