| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2044 |
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| Symbol | |
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| ID | 8419889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2342365 |
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| End bp | 2343129 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645038632 |
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| Product | methionine aminopeptidase, type I |
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| Protein accession | YP_003198906 |
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| Protein GI | 258406164 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0024] Methionine aminopeptidase |
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| TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000236003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000194463 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAAAAAAT TTCGAGGAGT CTTTCTCAAA AATGATCGCG AAATTGGCCT CCTCAGGGAG
GCCAATCGCA TTGTGTCCGA GATCCTTGAC CAGTTAGGTG AAGCGGTTCA ACCCGGCGTA
CAGACTCACG AATTCGAGCG TCTTGTCGAT GCGGTCTGTG CCAGGTATGA TGTCCGTCCG
GCCTTTAAAG GCTATTGCGG TTTTCCGCAT TCACTGTGCT GTTCAGTCAA TGAGGAGATC
GTTCACGGAT TTCCTTCTGA CAGACGTCTG CTTGAAGGGG ATATTGTCAG CTTCGATGTC
GGGGTGGTCT ATAAAGGATT TTACGGGGAT TCGGCCCGGA CCTTTGCGGT GGGCGAAGTC
CCTGATACCA CGCAAGAGTT GCTGGACACG ACCAGAGAAT CCTTGCATCA AGGCATAGAG
AGCGCGCGAG TCGGGAACGA ACTTGCGGAT ATCGCCCGAG CAGTGCAGAC ATATGTTGAA
AATCGGGGCT ATGCGGTAGT CAAGCGGTTC GTCGGTCACG GTATTGGCCG CCAGTTGCAT
GAAAAACCAG AAGTCCCTAA CTTTATTACC AACCGTATGG CGCGGCTGCC ATTGAAGTCA
GGCATGGTCC TGGCAATAGA GCCCATGGTC ACCATGGGTA CGGATGAGGT CGAGATTCTC
GAGGATAACT GGACAGCGGT TCCGAAAGAC CGCTCTTTGT CGGCCCATTT TGAACACACG
ATCGCAATCA CTAAAGATGG GCCGGAGATC CTCAGTCGTT CCTGA
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| Protein sequence | MKKFRGVFLK NDREIGLLRE ANRIVSEILD QLGEAVQPGV QTHEFERLVD AVCARYDVRP
AFKGYCGFPH SLCCSVNEEI VHGFPSDRRL LEGDIVSFDV GVVYKGFYGD SARTFAVGEV
PDTTQELLDT TRESLHQGIE SARVGNELAD IARAVQTYVE NRGYAVVKRF VGHGIGRQLH
EKPEVPNFIT NRMARLPLKS GMVLAIEPMV TMGTDEVEIL EDNWTAVPKD RSLSAHFEHT
IAITKDGPEI LSRS
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