| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2042 |
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| Symbol | rpsM |
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| ID | 8419887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2341835 |
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| End bp | 2342206 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645038630 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_003198904 |
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| Protein GI | 258406162 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00070968 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000175358 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGGCGAGAA TTGCAGGTGT AGACTTGCCC AGGAATAAGC GGGCCGATAT TGCTCTGACG
TATATTTATG GCATTGGCCG GACCACGGCC CTGGCTATCC TGGACAGCGT AGGTGTAGAC
TGGACCAAAA AAACGGACGC CTTGTCGAAC GACGAAGTCA ACTCCATCCG CAATGAGTTG
GAGAAGACCT ACAAGGTAGA GGGCGACCTT CGCCGCGAAG TCCGTGCGAA CATCAAGCGT
TTGATGGACA TTGGATGTTA TCGTGGCTTG CGCCATCGCC GGTCGCTCCC CGCTCGGGGA
CAGCGGACCG GGACCAATGC GCGGACGAGG AAAGGTCCGC GCCGGGCTGT CATGGGTAAG
AAAAAGAAGT AG
|
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| Protein sequence | MARIAGVDLP RNKRADIALT YIYGIGRTTA LAILDSVGVD WTKKTDALSN DEVNSIRNEL
EKTYKVEGDL RREVRANIKR LMDIGCYRGL RHRRSLPARG QRTGTNARTR KGPRRAVMGK
KKK
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