| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2026 |
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| Symbol | |
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| ID | 8419871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2323292 |
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| End bp | 2324773 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645038614 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_003198888 |
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| Protein GI | 258406146 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000241588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00894206 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTGATA CCCTTTCTGA CAGACTTGAC TCGATATTCA AGCGCATTAA AGGCCAAGGT
CGCCTGGACG AGAAGGCGAT CCAGGAGGGG TTGCGTGAGG TGCGCCTGGC CCTTTTGGAA
GCGGACGTCA ATTTTAAGGT GGTCAAGACC TTCACCGATC GCGTCCGGGA ACGGGCCATG
GGCCAGGAGG TCCTGTCCAG CCTGACACCA GGCCAGCAGG TCATCAAGAT TGTCCACGAG
GAGATGATCG ATCTGCTGGG TGGCAGTCAG GAAGGATTGA ATCTCAAAGG CCCGGCGCCG
CGGGTTATTA TGCTCGTCGG CCTCCAGGGA TCGGGAAAAA CGACCAGTTC CGCGAAGCTG
GCCCTGCAAC TGCGCCGCGA TAACCATGCG CCGCTGTTGG TGCCCGCTGA CGTTTACCGG
CCAGCGGCTA TCGACCAACT CCATCGTCTG GCCTCTGAGA TCGACATTCC GGCTTACCCG
TCGACTTCTG AGATGAATCC GGTGGATATC TGTCGCGACG CCCTCGAAAA GGCGCGCGAA
AACGGCCAGG ATACCGTTTT GCTGGACACG GCCGGCCGGC TCCATGTCGA TGAAAAACTC
ATGGATGAGC TGGCGCGGAT CAAAGAGGTC TGCGCTCCCA GTGAAATCCT GCTTGTGGCC
GATGCCATGA CCGGACAGGA CGCCGTCAAT GTGGCCGAGC GCTTTGACGA ATTGCTCGAC
TTGACCGGCG TTGTGCTGAC CAAGATGGAG GGGGATGCCC GCGGCGGGGC GGCCTTGTCT
ATCAAGTCCA TCACCGGCAA GCCCATCAAA TATATGGGGG TTGGGGAAAA GCTTAAGGAT
ATTGAGGCTT TTTATCCTGA TCGTGTGGCA TCGCGCATCC TGGGTATGGG CGATATCCTG
ACCTTGATTG AAAAAGCCCA GACCGATGTC AGCGAGCAGG AAGCCCAGGA GCTCGAAGAC
AAATTTCAGC GGGCGGATTT CGATCTCGAT GATTTCCGCA AACAGATGCG GCGGCTGCGC
AAAATCGGCT CCCTGGACAG CTTATTGAAG ATGTTGCCCG GGGCCGGAAA AATGCGGGAG
CAACTCCAAA ACGTCCAGAT GCCGGAAAAA GAACTGGTCA AATTGGAAGC CATGATCAGT
TCTATGACCG TCACGGAACG GAGTCGTCCG CAGTCCATCG ACACCAGCCG CAAGGAACGC
ATCGCCCGAG GCAGTGGGAC CACTGTTTCG GATGTGACTC AGCTGCTCAA AAATTTCAAC
CAGATGCAAA AGATGTTGAA AAAAATGGGC GGCAAGGGCA AAAAGAATAC TGCGGCTATG
CCCTCGGATA TGTCAGCAAT GGCTGGCATG TCCGGGATGC CTGGAATGCC GGGGGGGTCG
GGTGGCACCG GCGGTGGCCA GGATCCGCGC AAGCGCCAGA AGGAAATTGA AAAGCGGCGG
AAAAAAGCCA AAGCCAAAAA GAAACAACGC AAAAAGAAAT AA
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| Protein sequence | MFDTLSDRLD SIFKRIKGQG RLDEKAIQEG LREVRLALLE ADVNFKVVKT FTDRVRERAM
GQEVLSSLTP GQQVIKIVHE EMIDLLGGSQ EGLNLKGPAP RVIMLVGLQG SGKTTSSAKL
ALQLRRDNHA PLLVPADVYR PAAIDQLHRL ASEIDIPAYP STSEMNPVDI CRDALEKARE
NGQDTVLLDT AGRLHVDEKL MDELARIKEV CAPSEILLVA DAMTGQDAVN VAERFDELLD
LTGVVLTKME GDARGGAALS IKSITGKPIK YMGVGEKLKD IEAFYPDRVA SRILGMGDIL
TLIEKAQTDV SEQEAQELED KFQRADFDLD DFRKQMRRLR KIGSLDSLLK MLPGAGKMRE
QLQNVQMPEK ELVKLEAMIS SMTVTERSRP QSIDTSRKER IARGSGTTVS DVTQLLKNFN
QMQKMLKKMG GKGKKNTAAM PSDMSAMAGM SGMPGMPGGS GGTGGGQDPR KRQKEIEKRR
KKAKAKKKQR KKK
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