Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2015 |
Symbol | |
ID | 8419860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2315311 |
End bp | 2317110 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645038603 |
Product | phosphoenolpyruvate-protein phosphotransferase |
Protein accession | YP_003198877 |
Protein GI | 258406135 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.475884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGAC ATATTTTGTC TGGAATCCCT GTCTCCACCG GCATTACTAT CGGCCGGGTC TATTATCTCA ACCGGGGACG GTTTTGTCTC AGTGCCAGAC AGACCGTGGC CGAAGGGCTT GTGGACCAGG AAATCCATCG GCTCAAGTAC GCCTTTGACC AAGCCCTGGT CGAGCTTGAG GAGATACGGG CCAAGGTCCC TGAGGAACTC CGGGAGCACG CCTCGATCAT CGATTCGCAT TTGATGATCC TGCGCGATCC GAAACTGCGC CAGTCGGCCC AGAACTATGT CCGCGAAATG CGTTTGAACG CGGAATGGGC TCTGGAAAAG GCGGTTGACG ATATCGAGAA GGTCTTTGCC AGCATCGAGG ATGAATATAT CCGGGACCGG ATTCTGGATG TTCGCTCTGT GGCCGAGCGG GTCTATAAAC AAATGCTCGG TTGCGAGGAG GGCCCGAAGG CGATCACCAG TCGGGTCATT CTGGTGGCCC ATGACCTGAC TCCCGCTGAT ACCATCGAGA TGGAGGTGGA CAAGATCATG GGGTTTGCCA CCGCCCTGGG CGGGAAGACC TCGCATGTAG GCATTCTGGC CCGGTCGCTG CAGATTCCAG CCGTGGTGGG GGTGACCGAC CTTGAAGATT CGATTCAGGA TGACGACGAG GTCATCATCG ACGGTCTGCA GGGCAAAGTG TTCATTGCTC CCGACAATGA GGAACTGGCT CAGTATACCG AACTCAAGGA TCAGTTCGAG GCCTACCAAA GCACGATCAT GCGCAGCTGC CACTTGCCCG GGGAGACCAT CGACGGGTAC CGGGTCAACG TGCTGGCGAA TATCGAATTG TTCGAAGAGG TGACCTCGGT CCTTGATCAC GGCGGGGAGG GCATTGGCCT GTACCGGACT GAATACAGTT ACCTCAATCG CAATGAACTG CCTTCGGAAA ATGAACTCTT TGAGGAGTAT TGGGACCTGG CCTCCATCGT CGCCCCGGAG CGTCTGGTCA TCCGCACCCT CGATCTGGGC GGCGACAAAT TGAGCGATCT TTTCGGGCAC CTGGAGGAGG CCAATCCGGC CCTCGGATTG CGGGCGATCC GGTTTTGCCG CCAGTACCCC TATTTGTTCC GCACGCAATT GCGGGCCATT CTCCGGGCCA GTGTGACCGG GAATGTTTCG ATCATGTTTC CCATGGTTTC CGGACTCAAT GAGCTGGTCG AGCTGAAGCG GTTTGTCGAG GGCGTCAAAC AGGAATTGCG CCGCGAAAAT ATCGCCTACA ATCCGGATAC CCCCATCGGA ATCATGGTCG AGCTGCCGTC CGCAGTGATG ACCGCGGATA TCCTGGCCAA AGAAGTCGAT TTTTTCAGTA TCGGGACCAA CGATCTCATC CAATACTCAC TGGGGATCGA CCGGACCAAT AAATACGTCT CCTATCTGTA TCAGCCGCTG CACCCGGCCC TGTTGCGCAG CATCAAGTCT GTTGTCGACG CGGGACACCA GGCCGGTATC GAAGTCAGCC TCTGCGGCGA AATGGCCTCG GACCCGTTTT GCGTGCCCAT TTTGATGGGC ATGCAAGTGG ACAATTTGAG CATCAATCCG CAATCGATCC CGGGAATCAA GCGGATCATC CGCAACGCGA CCATGGAAGA ATGCGCCTAT CTGCTCAAAC AGGTCATCAA TAGTTCGTCG GTGGCCAAAA ATAACGCCCT GGTCCAGGAC ATTATCTTCA AGCGTTTTCC GGAAGAAATC ATGTTCTATT CCTCCATGCT CGGCAACGAT GAGGAGCGCC CGGGCGGATT ATTCGGGTAA
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Protein sequence | MARHILSGIP VSTGITIGRV YYLNRGRFCL SARQTVAEGL VDQEIHRLKY AFDQALVELE EIRAKVPEEL REHASIIDSH LMILRDPKLR QSAQNYVREM RLNAEWALEK AVDDIEKVFA SIEDEYIRDR ILDVRSVAER VYKQMLGCEE GPKAITSRVI LVAHDLTPAD TIEMEVDKIM GFATALGGKT SHVGILARSL QIPAVVGVTD LEDSIQDDDE VIIDGLQGKV FIAPDNEELA QYTELKDQFE AYQSTIMRSC HLPGETIDGY RVNVLANIEL FEEVTSVLDH GGEGIGLYRT EYSYLNRNEL PSENELFEEY WDLASIVAPE RLVIRTLDLG GDKLSDLFGH LEEANPALGL RAIRFCRQYP YLFRTQLRAI LRASVTGNVS IMFPMVSGLN ELVELKRFVE GVKQELRREN IAYNPDTPIG IMVELPSAVM TADILAKEVD FFSIGTNDLI QYSLGIDRTN KYVSYLYQPL HPALLRSIKS VVDAGHQAGI EVSLCGEMAS DPFCVPILMG MQVDNLSINP QSIPGIKRII RNATMEECAY LLKQVINSSS VAKNNALVQD IIFKRFPEEI MFYSSMLGND EERPGGLFG
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