Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2011 |
Symbol | |
ID | 8419856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2309679 |
End bp | 2312189 |
Gene Length | 2511 bp |
Protein Length | 836 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645038599 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_003198873 |
Protein GI | 258406131 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGGTG GAATCGCCAA AAAAATGTTT GGCTCGAAAA ACGAGCGTTT CTTGAAGACG GTCTGGCCCA TGGTGGAGAC CATCAATGGG TTGGAACCGC AGATGCAGGA GTTGGAAGAC GCAGATTTTC CGGCCAAGAT CAATCAATGG CGCGAGGAGG TGGCCCAGGG GCGCTCAGTG GATGAGTTGC TGCCCCAGGT CTTCGCTCTG GTTCGGGAAG CCGGGAAACG GGCCCTCGAA ATGCGGCATT TCGACGTCCA GCTTATGGGC GGTATTATTC TGCACCAGGG CCGGATCGCG GAAATGAAGA CCGGTGAGGG GAAAACGCTG GTCGCGACGT TGCCGTTGGT CCTCAACGCC TTGAGTGGCA AAGGGGCCCA TCTGGTGACG GTCAACGACT ATCTGGCCCG CCGGGACGCG GAATGGATGG GCCAGCTGTA CAATTTCCTC GGCCTGTCCG TGGGGAGCAT CATGCACGGC ATGACCGATG AGGAACGCAA AGCCGCCTAT GCCGCGGATA TCACCTATGG GACCAACAAC GAATTCGGTT TCGATTATCT GCGCGACCAC ATGAAATTCT ACGCCGATCA GTTGGTTCAA GGCGAACTCC ATTTCGCCAT CGTGGACGAG GTCGACTCCA TTTTGATCGA CGAGGCCCGG ACACCGCTGA TCATTTCCGG TCCGGCGGAA GATTCCACCG CCATGTACAA ACGGATCAAT ACCATCGTGC CCCAACTCAA GCGCGACCGG GATTTCAACG TCGACGAAAA GGCCAAGACC GTCACCTTCA CTGAGGACGG TGTGGCCCGC TGCGAACAGA TTCTGGGGCT GGAAAACCTT TTCGACGCCC AGAACATCCA TTTCCAGCAC CATATCCTGC AGGCGCTCAA GGCCCACGAA CTCTTCACCC GCGACGACGA CTATATCGTC AAAGACGGCC AGGTCATCAT CGTCGACGAA TTTACCGGCC GGCTCATGCC GGGGCGCCGT TTCAGCGACG GCCTGCACCA GGCCCTGGAA GCCAAGGAAG GGGTCAAGGT CGAGGCGGAA AACCAGACCC TGGCCCAGAT CACCTTCCAG AATTTTTTCC GCATGTACGA CAAGCTTTCA GGCATGACCG GTACCGCGGA TACCGAAGCC GTGGAATTCA ACCAGATCTA CAACCTGGAA GTCTCGGTCA TTCCGACCCA CAAGCCGATG GTCCGTGAAG ATTTTTCGGA TGTGGTCTAC CGGACCCAGC AGGAAAAATA CGAGGCCATC GCTCAGGAGA TCAGCGACCT GTACACCAAG GGCCAGCCTG TCCTGGTGGG CACCACCTCC ATCGACAAAT CGGAACTCAT TTCGAACCTG CTCAAGAAGC GCAAGGTGCC CCACGAGGTT TTGAACGCCA AGCACCACGA GAAAGAAGCT GAGATCGTGG CCGGCGCCGG TGAGCGGGGC AAAGTGACCA TCGCCACGAA CATGGCCGGC CGCGGGACGG ACATCGTGCT CGGCGACGGG GTTCGCGAAC TCGGCGGGTT GCACATCCTG GGCACGGAGC GCCACGAGAG CCGACGGATC GACAACCAGC TCCGGGGACG GTCCGGTCGT CAGGGGGATC CTGGCAGCTC CCGGTTTTAT CTGGCCCTGG ACGATGATCT GCTGCGGCTT TTCGGGTCTG ACCGGATTTC CGGGCTGATG CAGAAGCTCG GCGTTGAAGA AGGGCAGGCC ATTGAAAACA AGATGATTTC CCGGGCCATC GAGAATGCGC AGCGGCGGGT CGAGGCCCAT AACTTTGATA TCCGCAAGCA GCTGCTGGAA TACGACGACG TCATGAACCA GCAGCGCGAG GTCATTTACA CCCAGCGCCG GGAGATCATG GCCAGCGACG ACCTGGAGTC CATGATCGAC GAATTCGTCG ATGAAGTGGT GGACGTCATC TACCAGCCGG TGCACATGGC CGACAAAGAG GGCCCGGACC AGGAGACACT GGATATGGTT CAGGCCCAAT TGGAGGATGT GTTCGGGCTC AAGCGGTGGC TGGACACCTC CGCCGGCCTG CCGGACCAGG AGACGACCCG GGAGACGGTG CGCAAGATTC TGGCGCATCT CAAAGAAGAG GCCGGGGAGC ACTATCTGGA AATTCTGCGC TTCTTTCTGC TGGAGTCCCT GGACCGGATC TGGAAAGAGC ATCTGCTGAC CATGGACCAC CTCAAGGAAG GCATTGGCCT GCGCGGTTAT GGACAGAAGG ATCCGAAACA GGAATACAAG CGTGAAGGGT TTGAACTCTT TCAAGACATG CTTTTCCGGA TCAAGGAAAG CACCTTGAAG GCCCTGAGCC ATCTGCGTCT GCAGCGGGTG GCTGAAGAAG AACTCAAGCA CAAGGAACAG CCGCAGGACT TGAATTATTC CGGGGCCGAC GAAAGCGGCG AAGCGCAAAA GACCTACAAG CGGGAGCAGC CCAAGGTCGG TCGCAACGAT CCGTGCCCCT GTGGCAGCGG CAAGAAATAC AAACGGTGCT GCGGCCAATA A
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Protein sequence | MFGGIAKKMF GSKNERFLKT VWPMVETING LEPQMQELED ADFPAKINQW REEVAQGRSV DELLPQVFAL VREAGKRALE MRHFDVQLMG GIILHQGRIA EMKTGEGKTL VATLPLVLNA LSGKGAHLVT VNDYLARRDA EWMGQLYNFL GLSVGSIMHG MTDEERKAAY AADITYGTNN EFGFDYLRDH MKFYADQLVQ GELHFAIVDE VDSILIDEAR TPLIISGPAE DSTAMYKRIN TIVPQLKRDR DFNVDEKAKT VTFTEDGVAR CEQILGLENL FDAQNIHFQH HILQALKAHE LFTRDDDYIV KDGQVIIVDE FTGRLMPGRR FSDGLHQALE AKEGVKVEAE NQTLAQITFQ NFFRMYDKLS GMTGTADTEA VEFNQIYNLE VSVIPTHKPM VREDFSDVVY RTQQEKYEAI AQEISDLYTK GQPVLVGTTS IDKSELISNL LKKRKVPHEV LNAKHHEKEA EIVAGAGERG KVTIATNMAG RGTDIVLGDG VRELGGLHIL GTERHESRRI DNQLRGRSGR QGDPGSSRFY LALDDDLLRL FGSDRISGLM QKLGVEEGQA IENKMISRAI ENAQRRVEAH NFDIRKQLLE YDDVMNQQRE VIYTQRREIM ASDDLESMID EFVDEVVDVI YQPVHMADKE GPDQETLDMV QAQLEDVFGL KRWLDTSAGL PDQETTRETV RKILAHLKEE AGEHYLEILR FFLLESLDRI WKEHLLTMDH LKEGIGLRGY GQKDPKQEYK REGFELFQDM LFRIKESTLK ALSHLRLQRV AEEELKHKEQ PQDLNYSGAD ESGEAQKTYK REQPKVGRND PCPCGSGKKY KRCCGQ
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