Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1980 |
Symbol | |
ID | 8419825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2273412 |
End bp | 2274041 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645038568 |
Product | NUDIX hydrolase |
Protein accession | YP_003198842 |
Protein GI | 258406100 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.280065 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGA CAGAGACCCC GGCCTGGCTC CGCTGGGCCA GAGAAATCCA GGCCATCAGC CAGATCGGCC TGTATTACAG CAAGAATCAA TACGATGAGA TAAATTTCTC ACGGCTTATG GAGATCGCGG CAGAAATGGC CGCGGCGCAT TCCGATCTCG ACCAAACCAC GGCCATGACC GTGTTTGGGA GCCAACCCGG CTACGCCACA GTCAAGGTCG ATGTCCGGGG CGCTCTTGTC CGGGATTCCC AATTGCTATT GGTCAAAGAA CGCCGCGATG GCCGCTGGTG CATGCCCGGT GGTTGGGCCG ATGTCGGAGA GACCCCCTCG GAAATGGTCA GCCGGGAAGT CTTGGAGGAA AGCGGCTTCA CGGTGGTCCC GGAACGGATT GTCGGAGTCT ATGACGCCAA CCGCGCCGGA CGGCCGCTCT CGTTTTTCCA CGCCTACAAG ATCCTGTTTT TGTGCCGCAT CACTGGCGGA ACCGCCCGCC CCAGCGAGGA AACGGAGGCA GTCGAATTTT TCGACTTCGA CACCCTGCCG CCGCTGTCCT CCCCGCGCAC CTCTATGCGC CATATCGAAG ACCTGCAACG GTGTCTCCAA AACCCCGATC AGCCGACGGT CTTCGATTGA
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Protein sequence | MSETETPAWL RWAREIQAIS QIGLYYSKNQ YDEINFSRLM EIAAEMAAAH SDLDQTTAMT VFGSQPGYAT VKVDVRGALV RDSQLLLVKE RRDGRWCMPG GWADVGETPS EMVSREVLEE SGFTVVPERI VGVYDANRAG RPLSFFHAYK ILFLCRITGG TARPSEETEA VEFFDFDTLP PLSSPRTSMR HIEDLQRCLQ NPDQPTVFD
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